Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g00973 | ATGTCGATAGTGCAACTCTCTCCAACGGCACACTCCCAATTTTCTTCCCACCCCAATCCTCCGACAACCTCGGACCGCGGCATTTTATTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAACCCGGAGAAGGCTTTCCACTTGAACCCCACACTCCGCTCCTCCCCTCTGGCCGCCCTGGAATCCGTGGCGCGCTGTCTCTACTCTCTCGGAGTTCCACGCGCCGCCTTGGGGCGCATCCTCGACATGCACCCCGTGCTCCTCACGTGCGACCCCTATTCCCAACTCTATCCCCTCCTCGACTTCCTCCTCCATGAGGTCCCAATCCCCTTCCCCGACGTGCACCTCTGCATCCTCCGCTGCCCCAGATTGCTCGTTTCCAGCATCGATGATCAATTGCGTCCCACGCTGTTCTTTCTCAGGGAATTAGGGTTCTGTGGGCCACACTCCCTCACGTGCCAGACCACCCTGCTTCTCGTGTCCAGCTTGGAGGACACCCTTTTGCGCAAGATTGAGTTTTTGAAGAGTTTGGGATTCACCCACATCGAGGTTTCCAACATGGTCGTCAGGTCCCCTGGGTTATTGACTTTAAGCGTGAAGAAGAATTTAATGCCCAAGCTGGAATTTTTCTTGAAGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCTCAGTACTTTTCTTTTAGCTTGGAACGGAGGATTAGGCCCAGATTTGGGATGCTTAGGCAGCTTGGCGTGTCGATGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGAGTTTAATGCTAGGTTGCTTGAATTAAGGTTTAAGACTCTCGAGTTTGGAGTAGGACAATAG | 852 | 0.5293 | MSIVQLSPTAHSQFSSHPNPPTTSDRGILFHEKVRYLKALKVNPEKAFHLNPTLRSSPLAALESVARCLYSLGVPRAALGRILDMHPVLLTCDPYSQLYPLLDFLLHEVPIPFPDVHLCILRCPRLLVSSIDDQLRPTLFFLRELGFCGPHSLTCQTTLLLVSSLEDTLLRKIEFLKSLGFTHIEVSNMVVRSPGLLTLSVKKNLMPKLEFFLKEMNGDVAELKRFPQYFSFSLERRIRPRFGMLRQLGVSMPLEDMLKVSDGEFNARLLELRFKTLEFGVGQ | 283 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g00973 | 283 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Viun2g00973 | 283 | Gene3D | Transcription termination factor 3, mitochondrial | 32 | 278 | IPR038538 | - | |
Viun2g00973 | 283 | SMART | mt_12 | 151 | 182 | IPR003690 | GO:0003690|GO:0006355 | |
Viun2g00973 | 283 | SMART | mt_12 | 117 | 148 | IPR003690 | GO:0003690|GO:0006355 | |
Viun2g00973 | 283 | SMART | mt_12 | 80 | 112 | IPR003690 | GO:0003690|GO:0006355 | |
Viun2g00973 | 283 | SMART | mt_12 | 187 | 219 | IPR003690 | GO:0003690|GO:0006355 | |
Viun2g00973 | 283 | SMART | mt_12 | 220 | 251 | IPR003690 | GO:0003690|GO:0006355 | |
Viun2g00973 | 283 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Viun2g00973 | 283 | Pfam | mTERF | 52 | 265 | IPR003690 | GO:0003690|GO:0006355 | |
Viun2g00973 | 283 | PANTHER | CGI-12 PROTEIN-RELATED | 53 | 270 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g00973 | Viun-Chr2 | 20389386 | 20390511 | Dispersed/Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Viun2g00973 | mTERF | 4e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g00973 | K15032 | - | gmx:100785219 | 434.491 |