Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00966 ATGAAAGCAAGCTGGTTGAACAGCTGGCACCGCATACTGACAGGTTGGTGCCAACCTAGCCCAGTAACGAAACGACATCGTCTCTTAATAAATAAACGACCAGTGTTTCGGTACGCGCCATGTCACGAACAGCATCATCCTCTTCCACGCGACATGTCGATAGTGCAACTCTCTCCAACGGCACACTCCCAATTTTCTTCCCACCCCAATCCTCCGACAACCTCGGACCGCGGCATTTTATTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAACCCGGAGAAGGCTTTCCACTTGAACCCCACACTCCGCTCCTCCCCTCTGGCCGCCCTGGAATCCGTGACGCGCTGTCTCTACTCTCTCGGAGTTCCACGCGCCGCCTTGGGGCGCATCCTCGACATGCACCCCGTGCTCCTCACGTGCGACCCCTATTCCCAACTCTATCCCCTCCTCGACTTCCTCCTCCATGAGGTCCCAATCCCCTTCCCCGACGTGCACCTCTGCATCCTCCGCTGCCCCAGATTGCTCGTTTCCAGCATCGATGATCAATTGCGTCCCACGCTGTTCTTTCTCAGGGAATTAGGGTTCTGTGGGCCACACTCCCTCACGTGCCAGACCACCCTGCTTCTCGTGTCCAGCTTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGAGTTTGGGATTCACCCACATCGAGGTTTCCAACATGGTCGTCAGGTCCCCTGGGTTATTGACTTTAAGCGTGAAGAAGAATTTAATGCCCAAGCTGGAATTTTTCTTGAAGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCTCAGTACTTTTCTTTTAGCTTGGAACGGAGGATTAGGCCCAGATTTGGGATGCTTAGGCAGCTTGGCGTGTCGATGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGAGTTTAATGCTAGGTTGCTTGAATTAAGGTTTAAGACTCTCGAGTTTGGAGTAGGACAATAG 1005 0.5244 MKASWLNSWHRILTGWCQPSPVTKRHRLLINKRPVFRYAPCHEQHHPLPRDMSIVQLSPTAHSQFSSHPNPPTTSDRGILFHEKVRYLKALKVNPEKAFHLNPTLRSSPLAALESVTRCLYSLGVPRAALGRILDMHPVLLTCDPYSQLYPLLDFLLHEVPIPFPDVHLCILRCPRLLVSSIDDQLRPTLFFLRELGFCGPHSLTCQTTLLLVSSLEDTLLPKIEFLKSLGFTHIEVSNMVVRSPGLLTLSVKKNLMPKLEFFLKEMNGDVAELKRFPQYFSFSLERRIRPRFGMLRQLGVSMPLEDMLKVSDGEFNARLLELRFKTLEFGVGQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00966 334 Gene3D Transcription termination factor 3, mitochondrial 82 329 IPR038538 -
Viun2g00966 334 PANTHER CGI-12 PROTEIN-RELATED 105 321 IPR003690 GO:0003690|GO:0006355
Viun2g00966 334 SMART mt_12 131 163 IPR003690 GO:0003690|GO:0006355
Viun2g00966 334 SMART mt_12 238 270 IPR003690 GO:0003690|GO:0006355
Viun2g00966 334 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Viun2g00966 334 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Viun2g00966 334 SMART mt_12 202 233 IPR003690 GO:0003690|GO:0006355
Viun2g00966 334 Pfam mTERF 103 316 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00966 Viun-Chr2 20328598 20330508 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun2g00966 mTERF 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00966 K15032 - gmx:100785219 439.884