Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00965 ATGTCGATAGTGCAACTCTCTCCAACGGCACACTCCCAATTTTCTTCCCACCCCAATCCTCCGACAACCTCGGACCGCGGCATTTTATTCCACGAAAAGGTGCGCTACCTTAAAGCCCTCAAAGTGAACCCGGAGAAGGCTTTCCACTTGAACCCCACACTCCGCTCCTCCCCTCTGGTCGCCCTGGAATCTGTGACGCGCTGTCTCTACTCTCTCGGAGTTCCACGCGCCGCCTTGGGGCGCATCCTCGACATGCACCCCGTGCTCCTCACGTGCGACCCCTATTCCCAACTCTATCCCCTCCTTGACTTCCTCCTCCATGAGGTCCCAATCCCCTTCCCCGACGTGCACCTCTGCATCCTCCGCTGCCCCAGATTGCTCGTTTCCAGCATCGATGATCAATTGCGTCCCACGCTGTTCTTTCTCAGGGAATTAGGGTTCTGTGGGCCACACTCCCTCACGTGCCAGACCACCCTGCTTCTCGTGTCCAGCTTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAAGAGTTTGGGATTCACCCACATCGAGGTTTCCAACATGGTCGTCAGGTCCCCTGGGTTATTGACTTTAAGCGTGAAGAAGAATTTAATGCCCAAGCTGGAATTTTTCTTGAAGGAGATGAATGGGGATGTTGCTGAGCTCAAGAGGTTTCCTCAGTACTTTTCTTTTAGCTTGGAACGGAGGATTAGGTCCAGATTTGGGATGCTTAGGCAGCTTGGCGTGTCGATGCCGTTGGAAGATATGTTGAAGGTTAGTGATGGCGAGTTTAATGCTAGGTTGCTTGAATTAAGGTTTAAGACTCTCGAGTTTGGAGTAGGACAATAG 852 0.5235 MSIVQLSPTAHSQFSSHPNPPTTSDRGILFHEKVRYLKALKVNPEKAFHLNPTLRSSPLVALESVTRCLYSLGVPRAALGRILDMHPVLLTCDPYSQLYPLLDFLLHEVPIPFPDVHLCILRCPRLLVSSIDDQLRPTLFFLRELGFCGPHSLTCQTTLLLVSSLEDTLLPKIEFLKSLGFTHIEVSNMVVRSPGLLTLSVKKNLMPKLEFFLKEMNGDVAELKRFPQYFSFSLERRIRSRFGMLRQLGVSMPLEDMLKVSDGEFNARLLELRFKTLEFGVGQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00965 283 PANTHER CGI-12 PROTEIN-RELATED 49 270 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 SMART mt_12 151 182 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 SMART mt_12 187 219 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 SMART mt_12 80 112 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 MobiDBLite consensus disorder prediction 1 26 - -
Viun2g00965 283 MobiDBLite consensus disorder prediction 1 23 - -
Viun2g00965 283 Pfam mTERF 53 265 IPR003690 GO:0003690|GO:0006355
Viun2g00965 283 Gene3D Transcription termination factor 3, mitochondrial 32 278 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00965 Viun-Chr2 20322604 20323694 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun2g00965 mTERF 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00965 K15032 - gmx:100785219 435.647