Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00932 ATGAGCACCGGCAGCAGCAGATCGTCCGCCACGGCGGCGAAGGAGAAGGCTCGGGTGAGTCGGACGTCTCTCATTCTGTGGCACTCGCACCAAAACGATGCCGCGTCTGTGCGGAAGCTTCTTGAGGAGGATCCATCGCTGGTGAAGGCAAGGGATTACGACAGCCGCACGCCGCTGCATGTGGCTTCGCTCCACGGCTGGGTCGAGGTTGCTAACTGCTTGCTCGAATTCGGTGCTGACGTCAATGCTTTGGATCGTTGGAAAAACACTCCTTTGGCTGATGCAGAAGGAGCTAAAAAAATGCCGATAATCGACCTTTTGAAGTCAAATGGAGGCTTGTCTTATGGCCAAAATGGAAGTCATTCTGAAAAGGGCCAAAATGTTCTTCCCCCATTGCCTAACAAATGTGACTGGGAAGTTGACCCATCTGAGCTGGACTTCTCTCATTCAGTTTGCATTGGAAAGGGATCTTTTGGCGAGATCGTAAAAGCCCATTGGCGTGGAACGCCTGTTGCCGTCAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTTAATTTACTTGTGAAACTTCGACACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACAGACAAGAAGCCTCTTATGTTAATTACTGAGTATCTAAGAGGAGGTGATCTTCATAAGTACCTCAAGGACAAAAGTTCTCTTAGTCCATCAGCAGCTATCAACTTTGGCTTGGATATTGCTAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATCATCCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATACTAGTGCCGACCATTTAAAAGTTGGTGATTTTGGACTTAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACGGGTGAAACTGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGACGTGTTCTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGTGAACCGCCTTTTTCAAATTATGAACCATATGATGGAGCCAAATATGTGGCAGAAGGACACAGGCCTTCATTTCGATCAAAGAGTTATACCTCTGACCTGCGAGATTTAACAGAGGAGTGCTGGTCTTCTGAGATAAGTCAAAGACCTTCGTTCATAGATATCCTTAAACGGCTTGAAAAGATCAAGGAAAATTTGCCTTCAGATCATCACTGGAGAGTGTTCGCTTCATGA 1272 0.4544 MSTGSSRSSATAAKEKARVSRTSLILWHSHQNDAASVRKLLEEDPSLVKARDYDSRTPLHVASLHGWVEVANCLLEFGADVNALDRWKNTPLADAEGAKKMPIIDLLKSNGGLSYGQNGSHSEKGQNVLPPLPNKCDWEVDPSELDFSHSVCIGKGSFGEIVKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDKKPLMLITEYLRGGDLHKYLKDKSSLSPSAAINFGLDIARGMAYLHNEPNVIIHRDLKPRNVLLVNTSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFSNYEPYDGAKYVAEGHRPSFRSKSYTSDLRDLTEECWSSEISQRPSFIDILKRLEKIKENLPSDHHWRVFAS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00932 423 SUPERFAMILY Protein kinase-like (PK-like) 146 417 IPR011009 -
Viun2g00932 423 SMART serkin_6 147 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00932 423 ProSitePatterns Protein kinases ATP-binding region signature. 153 174 IPR017441 GO:0005524
Viun2g00932 423 Pfam Ankyrin repeats (many copies) 56 92 IPR002110 GO:0005515
Viun2g00932 423 SMART ANK_2a 54 83 IPR002110 GO:0005515
Viun2g00932 423 Gene3D Transferase(Phosphotransferase) domain 1 227 419 - -
Viun2g00932 423 SUPERFAMILY Ankyrin repeat 25 111 IPR036770 -
Viun2g00932 423 Pfam Protein tyrosine and serine/threonine kinase 152 405 IPR001245 GO:0004672|GO:0006468
Viun2g00932 423 Gene3D - 2 124 IPR036770 -
Viun2g00932 423 FunFam Integrin-linked protein kinase family 226 421 - -
Viun2g00932 423 PIRSF ILK 1 423 - -
Viun2g00932 423 Gene3D Phosphorylase Kinase; domain 1 139 226 - -
Viun2g00932 423 CDD STKc_MAP3K-like 153 405 - -
Viun2g00932 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Viun2g00932 423 ProSiteProfiles Ankyrin repeat region circular profile. 54 86 - -
Viun2g00932 423 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 60 410 - -
Viun2g00932 423 FunFam serine/threonine-protein kinase STY46-like 140 226 - -
Viun2g00932 423 ProSiteProfiles Protein kinase domain profile. 147 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00932 423 ProSiteProfiles Ankyrin repeat profile. 54 86 IPR002110 GO:0005515
Viun2g00932 423 PRINTS Tyrosine kinase catalytic domain signature 260 278 IPR001245 GO:0004672|GO:0006468
Viun2g00932 423 PRINTS Tyrosine kinase catalytic domain signature 222 235 IPR001245 GO:0004672|GO:0006468
Viun2g00932 423 PRINTS Tyrosine kinase catalytic domain signature 376 398 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00932 Viun-Chr2 20006044 20012551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00932 14 423 MAP Kinase Kinase Kinase AT1G14000 81.463 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Viun2g00932 PK_Tyr_Ser-Thr 6.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00932 - - gmx:100789273 762.296