Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00931 ATGAGCACCGGCAGCAGCAGATCGTCCGCCACGGCGGCGAAGGAGAAGGCTCGGGTGAGTCGGACGTCTCTCATTCTGTGGCACTCGCACCAAAACGATGCCGCGTCTGTGCGGAAGCTTCTTGAGGAGGATCCATCGCTGGTGAAGGCAAGGGATTACGACAGCCGCACGCCGCTGCATGTGGCTTCGCTCCACGGCTGGGTCGAGGTTGCTAACTGCTTGCTCGAATTCGGTGCTGACGTCAATGCTTTGGATCGTTGGAAAAACACTCCTTTGGCTGATGCAGAAGGAGCTAAAAAAATGCCGATAATCGACCTTTTGAAGTCAAATGGAGGCTTGTCTTATGGCCAAAATGGAAGTCATTCTGAAAAGGGCCAAAATGTTCTTCCCCCATTGCCTAACAAATGTGACTGGGAAGTTGACCCATCTGAGCTGGACTTCTCTCATTCAGTTTGCATTGGAAAGGGATCTTTTGGCGAGATCGTAAAAGCCCATTGGCGTGGAACGCCTGTTGCCGTCAAACGTATTCTTCCATCTCTGTCAGATGATAGATTGGTGATTCAGGACTTCAGGCACGAGGTTAATTTACTTGTGAAACTTCGACACCCTAATGTTGTTCAATTTCTTGGAGCTGTTACAGACAAGAAGCCTCTTATGTTAATTACTGAGTATCTAAGAGGAGGTGATCTTCATAAGTACCTCAAGGACAAAAGTTCTCTTAGTCCATCAGCAGCTATCAACTTTGGCTTGGATATTGCTAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATCATCCATCGAGACCTAAAGCCAAGGAATGTTCTTTTAGTCAATACTAGTGCCGACCATTTAAAAGTTGGTGATTTTGGACTTAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACGGGTGAAACTGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGACGTGTTCTCCTTTGCAATGATTCTGTATGAGATGCTTGAAGGTGAACCGCCTTTTTCAAATTATGAACCATATGATGGAGCCAAATATGTGGCAGAAGGACACAGGCCTTCATTTCGATCAAAGAGTTATACCTCTGACCTGCGAGAAGGAGTGCTGGTCTTCTGA 1164 0.4613 MSTGSSRSSATAAKEKARVSRTSLILWHSHQNDAASVRKLLEEDPSLVKARDYDSRTPLHVASLHGWVEVANCLLEFGADVNALDRWKNTPLADAEGAKKMPIIDLLKSNGGLSYGQNGSHSEKGQNVLPPLPNKCDWEVDPSELDFSHSVCIGKGSFGEIVKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDKKPLMLITEYLRGGDLHKYLKDKSSLSPSAAINFGLDIARGMAYLHNEPNVIIHRDLKPRNVLLVNTSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFSNYEPYDGAKYVAEGHRPSFRSKSYTSDLREGVLVF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00931 387 CDD STKc_MAP3K-like 153 369 - -
Viun2g00931 387 FunFam serine/threonine-protein kinase STY46-like 140 226 - -
Viun2g00931 387 ProSitePatterns Protein kinases ATP-binding region signature. 153 174 IPR017441 GO:0005524
Viun2g00931 387 SUPERFAMILY Ankyrin repeat 25 111 IPR036770 -
Viun2g00931 387 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 60 375 - -
Viun2g00931 387 SMART ANK_2a 54 83 IPR002110 GO:0005515
Viun2g00931 387 Gene3D - 2 124 IPR036770 -
Viun2g00931 387 Gene3D Transferase(Phosphotransferase) domain 1 139 385 - -
Viun2g00931 387 PIRSF ILK 1 385 - -
Viun2g00931 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Viun2g00931 387 ProSiteProfiles Ankyrin repeat region circular profile. 54 86 - -
Viun2g00931 387 Pfam Ankyrin repeats (many copies) 56 92 IPR002110 GO:0005515
Viun2g00931 387 Pfam Protein tyrosine and serine/threonine kinase 152 371 IPR001245 GO:0004672|GO:0006468
Viun2g00931 387 ProSiteProfiles Ankyrin repeat profile. 54 86 IPR002110 GO:0005515
Viun2g00931 387 SUPERFAMILY Protein kinase-like (PK-like) 146 373 IPR011009 -
Viun2g00931 387 ProSiteProfiles Protein kinase domain profile. 147 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00931 387 SMART serkin_6 147 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00931 Viun-Chr2 20006042 20011692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00931 14 385 MAP Kinase Kinase Kinase AT1G14000 82.527 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Viun2g00931 PK_Tyr_Ser-Thr 1.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00931 - - gmx:100789273 695.271