Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g00914 | ATGGCGGGCGGCGGAAGTGGGGACCGGCCACCGTGGAAGGAGGCGGCGCCGCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGCGGCTTCAGTCCTGGTCCCATGACTCTTCTCTCTGGCTTTTTGACCGATGGGGATGACAGCAACAAGTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGACCTCCACCGTCGCCGTACACGACTCGTATGGCCTCTTTTCACCTTCCCAGATGTCATTTGGAATGACACACCAGCAGGCACTAGCCCAAGTTTCAGTGCAGGCTTCACAAGCTAACTCAAACATGCATATTCAGGCTGAACATTCACTATCATCACCTACCTCATTCACACAGGTTCCTGCAGCTACTTCCAACACCACACAACAGCTGGTTCCACCCTTAAATGCAGATTCTTGGGCCACAATGACTGAATCCACTGATCATTCTCACTCTGAACAAAAGTTGCAATCTTCATCGCTGAATGTTGATAAGCCTGCAGATGATGGATACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACGCATCCACACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCCCTTGAGGGTCATGTTACTGCAATTATTTATAAAGGAGAACACAATCATCAACGTCCTCATCCTAATAAACGCTCAAAAGATTCTGTGGCTTCAAATGAACATTCAAATATGCAAGGGAATGCTTCTTCTTATCAAGGGATGGCTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTTGGTGATCATGAAGCTGCAGATGATGAGAAAAATGTTGAGCCTGACCCCAAGAGGAGTAAAACAGAAGCCACAAATTTGGATCCAGCATCTTCGCATAGGACGGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAGAAAGTTGTGAAAGGCAACCCTTATCCGAGGAGCTATTACAAATGTACAACACCAGGTTGTAAGGTCCGAAAGCATGTGGAGAGGGCTTCAACAGATCCTAAAGCTGTGATAACAACATATGAAGGAAAACACAACCATGATGTTCCAGCTGCTAAGACCAGCAGCCATGTTATGGCAGGTAACAACACTTCACAGATAAAGTCACAGAATTCCAATCATAGAAGACAAAGTTTTGGCAGCAGAGATATTGGTGGCAATGAACAACAGCCTGTTGCAAGGCTAAGGTTGAAGGAAGAGCAGATAACCTAG | 1362 | 0.4684 | MAGGGSGDRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLTDGDDSNKSFSQLLAGAMASPVTSTVAVHDSYGLFSPSQMSFGMTHQQALAQVSVQASQANSNMHIQAEHSLSSPTSFTQVPAATSNTTQQLVPPLNADSWATMTESTDHSHSEQKLQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPHCPVKKKVERSLEGHVTAIIYKGEHNHQRPHPNKRSKDSVASNEHSNMQGNASSYQGMAKMDPESSQATADHLSGSDSEEVGDHEAADDEKNVEPDPKRSKTEATNLDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHVMAGNNTSQIKSQNSNHRRQSFGSRDIGGNEQQPVARLRLKEEQIT | 453 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g00914 | 453 | FunFam | WRKY transcription factor 33 | 327 | 393 | - | - | |
Viun2g00914 | 453 | SUPERFAMILY | WRKY DNA-binding domain | 332 | 400 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 230 | 249 | - | - | |
Viun2g00914 | 453 | SMART | WRKY_cls | 179 | 237 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | SMART | WRKY_cls | 340 | 399 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | ProSiteProfiles | WRKY domain profile. | 180 | 238 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | Pfam | WRKY DNA -binding domain | 180 | 236 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | Pfam | WRKY DNA -binding domain | 341 | 397 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | FunFam | WRKY transcription factor | 162 | 239 | - | - | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 412 | 453 | - | - | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 121 | 180 | - | - | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 412 | 435 | - | - | |
Viun2g00914 | 453 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 93 | 424 | IPR044810 | GO:0003700 | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 250 | 282 | - | - | |
Viun2g00914 | 453 | Gene3D | WRKY domain | 325 | 401 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | Gene3D | WRKY domain | 162 | 239 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 121 | 177 | - | - | |
Viun2g00914 | 453 | SUPERFAMILY | WRKY DNA-binding domain | 177 | 238 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | ProSiteProfiles | WRKY domain profile. | 335 | 400 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 312 | 327 | - | - | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 284 | 311 | - | - | |
Viun2g00914 | 453 | MobiDBLite | consensus disorder prediction | 230 | 327 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g00914 | Viun-Chr2 | 19826961 | 19831004 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g00914 | 19 | 65 | WRKY Transcription Factor Family | AT2G03340 | 63.265 | 3.28e-09 | 57.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Viun2g00914 | WRKY | 1.3e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g00914 | - | - | gmx:100127369 | 753.436 |