Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00914 ATGGCGGGCGGCGGAAGTGGGGACCGGCCACCGTGGAAGGAGGCGGCGCCGCCTCGACCCACCATCAGTCTCCCTCCAAGGGCTGCTTCCATGGAGACCCTTTTCAATGGCGGCTTCAGTCCTGGTCCCATGACTCTTCTCTCTGGCTTTTTGACCGATGGGGATGACAGCAACAAGTCCTTCTCTCAGCTCCTCGCCGGAGCCATGGCTTCTCCGGTGACCTCCACCGTCGCCGTACACGACTCGTATGGCCTCTTTTCACCTTCCCAGATGTCATTTGGAATGACACACCAGCAGGCACTAGCCCAAGTTTCAGTGCAGGCTTCACAAGCTAACTCAAACATGCATATTCAGGCTGAACATTCACTATCATCACCTACCTCATTCACACAGGTTCCTGCAGCTACTTCCAACACCACACAACAGCTGGTTCCACCCTTAAATGCAGATTCTTGGGCCACAATGACTGAATCCACTGATCATTCTCACTCTGAACAAAAGTTGCAATCTTCATCGCTGAATGTTGATAAGCCTGCAGATGATGGATACAACTGGAGGAAGTATGGACAGAAACAGGTGAAGGGTAGTGAATTTCCTCGAAGTTATTACAAATGCACGCATCCACACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCCCTTGAGGGTCATGTTACTGCAATTATTTATAAAGGAGAACACAATCATCAACGTCCTCATCCTAATAAACGCTCAAAAGATTCTGTGGCTTCAAATGAACATTCAAATATGCAAGGGAATGCTTCTTCTTATCAAGGGATGGCTAAGATGGATCCAGAGTCAAGTCAGGCAACAGCTGATCATCTATCAGGAAGTGACAGTGAGGAAGTTGGTGATCATGAAGCTGCAGATGATGAGAAAAATGTTGAGCCTGACCCCAAGAGGAGTAAAACAGAAGCCACAAATTTGGATCCAGCATCTTCGCATAGGACGGTCACTGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTTTTAGATGATGGTTACAGATGGCGAAAATATGGGCAGAAAGTTGTGAAAGGCAACCCTTATCCGAGGAGCTATTACAAATGTACAACACCAGGTTGTAAGGTCCGAAAGCATGTGGAGAGGGCTTCAACAGATCCTAAAGCTGTGATAACAACATATGAAGGAAAACACAACCATGATGTTCCAGCTGCTAAGACCAGCAGCCATGTTATGGCAGGTAACAACACTTCACAGATAAAGTCACAGAATTCCAATCATAGAAGACAAAGTTTTGGCAGCAGAGATATTGGTGGCAATGAACAACAGCCTGTTGCAAGGCTAAGGTTGAAGGAAGAGCAGATAACCTAG 1362 0.4684 MAGGGSGDRPPWKEAAPPRPTISLPPRAASMETLFNGGFSPGPMTLLSGFLTDGDDSNKSFSQLLAGAMASPVTSTVAVHDSYGLFSPSQMSFGMTHQQALAQVSVQASQANSNMHIQAEHSLSSPTSFTQVPAATSNTTQQLVPPLNADSWATMTESTDHSHSEQKLQSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPHCPVKKKVERSLEGHVTAIIYKGEHNHQRPHPNKRSKDSVASNEHSNMQGNASSYQGMAKMDPESSQATADHLSGSDSEEVGDHEAADDEKNVEPDPKRSKTEATNLDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHVMAGNNTSQIKSQNSNHRRQSFGSRDIGGNEQQPVARLRLKEEQIT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00914 453 FunFam WRKY transcription factor 33 327 393 - -
Viun2g00914 453 SUPERFAMILY WRKY DNA-binding domain 332 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 MobiDBLite consensus disorder prediction 230 249 - -
Viun2g00914 453 SMART WRKY_cls 179 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 SMART WRKY_cls 340 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 ProSiteProfiles WRKY domain profile. 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 Pfam WRKY DNA -binding domain 341 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 FunFam WRKY transcription factor 162 239 - -
Viun2g00914 453 MobiDBLite consensus disorder prediction 1 24 - -
Viun2g00914 453 MobiDBLite consensus disorder prediction 412 453 - -
Viun2g00914 453 MobiDBLite consensus disorder prediction 121 180 - -
Viun2g00914 453 MobiDBLite consensus disorder prediction 412 435 - -
Viun2g00914 453 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 424 IPR044810 GO:0003700
Viun2g00914 453 MobiDBLite consensus disorder prediction 250 282 - -
Viun2g00914 453 Gene3D WRKY domain 325 401 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 Gene3D WRKY domain 162 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 MobiDBLite consensus disorder prediction 121 177 - -
Viun2g00914 453 SUPERFAMILY WRKY DNA-binding domain 177 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 ProSiteProfiles WRKY domain profile. 335 400 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00914 453 MobiDBLite consensus disorder prediction 312 327 - -
Viun2g00914 453 MobiDBLite consensus disorder prediction 284 311 - -
Viun2g00914 453 MobiDBLite consensus disorder prediction 230 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00914 Viun-Chr2 19826961 19831004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00914 19 65 WRKY Transcription Factor Family AT2G03340 63.265 3.28e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun2g00914 WRKY 1.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00914 - - gmx:100127369 753.436