Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00861 ATGGAAGACAAGGACAGAGCAACCTCCGATCCCGCCGCGGTTGAGTTTGCCGGCGACACGAGTTGGACATTCGCCGCCGATGGCTCAGACGCCGCCTACTTGTTCTCCGGCGATGGAGAGCGAAGCGTACTCAGGGAATTCGGGTGGAACCTCGAACCGGACCAGTTGAACCGGATCGGCACCGACGACGGATTGTGGATGCCGGTTCAATCCTCTCTGACCTGTTCGATTGAACCGGCCGCTGCTGCATCGTCGCGGTCGAATAACCAGTCGGTGTCGTCGAGCTCCAGCGAGGATCAGCCGGAGAAATCCACAGTCTCTGACGAGAAACCGCCTGAGATACCGATTAAAGGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAAGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGCCCATTCCCTAGGAGCTACTACCGCTGCACAAACAGCAAATGCACGGTGAAGAAGAGGGTTGAACGCTCTTCCGAGGACCCAACGATTGTGATTACCACATATGAAGGCCAACACTGTCATCACACCGTTGGATTTCCTCGAGGAGGAATCATTAGTCACGAGGCTGCTGCCTTTGCGGGCCAGTTGGCTCCTACAATGTCGCAGTTTTATTATCCAATTCATTTACCCAGAGAGACTAATAATATAAATACTGTCAGCTCCATCTCTCAGCCATGCCAAGCACAGGATGATGCATCTGGAGGATCCAGCGCTGTAATGCCAGCTGATGCATCGTCACTGCAGCCTCCTACGGATGAAGGTTTGCTTGGAGATATTGTACCTCCGGGAATGCGTACCAGATGA 879 0.5233 MEDKDRATSDPAAVEFAGDTSWTFAADGSDAAYLFSGDGERSVLREFGWNLEPDQLNRIGTDDGLWMPVQSSLTCSIEPAAAASSRSNNQSVSSSSSEDQPEKSTVSDEKPPEIPIKGKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAAFAGQLAPTMSQFYYPIHLPRETNNINTVSSISQPCQAQDDASGGSSAVMPADASSLQPPTDEGLLGDIVPPGMRTR 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00861 292 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 239 IPR044810 GO:0003700
Viun2g00861 292 MobiDBLite consensus disorder prediction 80 130 - -
Viun2g00861 292 MobiDBLite consensus disorder prediction 248 269 - -
Viun2g00861 292 FunFam WRKY transcription factor 57 128 202 - -
Viun2g00861 292 MobiDBLite consensus disorder prediction 102 119 - -
Viun2g00861 292 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00861 292 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g00861 292 MobiDBLite consensus disorder prediction 80 101 - -
Viun2g00861 292 SUPERFAMILY WRKY DNA-binding domain 134 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g00861 292 MobiDBLite consensus disorder prediction 248 292 - -
Viun2g00861 292 Gene3D WRKY domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g00861 292 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00861 Viun-Chr2 19272220 19279342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00861 9 290 WRKY Transcription Factor Family AT1G69310 48.039 3.42e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun2g00861 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00861 - - gmx:100170676 463.381