Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00845 ATGGCTGCCGAGAAAGAGAGAGACACACAGGTTTACTTGGCCAAACTTGCCGAGCAGGCCGAGAGATACGAAGAAATGGTTGAGTGTATGAAGAAAGTAGCAAAACTTGATCTTGATCTAACTGTGGAAGAAAGGAACCTCCTCTCAGTGGGATACAAAAATGTCATTGGTGCACGGAGGGCCTCCTGGCGCATCATGTCCTCAATTGAGCAGAAGGAAGAGGCTAAGGGTAATGAACACAATGTCAAACTGATCAAGGGCTACCGCCAAAAAGTTGAGGATGAACTCTCCAAAATTTGTGGTGACATTCTGACTATTATAGACAAGCACCTGATTCCTTCTTCTGGATCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTTCCGGTACCTTGCTGAGTTCAAGACTGACCAAGAAAGAAAAGAGGCAGCTGAGCAGTCACTGAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATTCGTCTTGGACTTGCCCTCAATTTCTCTGTCTTTTACTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCGGAATTGGACACCCTGAGTGAAGAGTCATACAAGGACAGCACCTTGATCATGCAGCTGTTGAGAGACAACCTCACACTCTGGACCTCTGATTTGCCAGAGGATGGAGGTGAGGACAACATAAAAGCTGAAGAAGCCAAACCTACCGAGCCTGAGCATTGA 780 0.4538 MAAEKERDTQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEEAKGNEHNVKLIKGYRQKVEDELSKICGDILTIIDKHLIPSSGSAEASVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKAEEAKPTEPEH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00845 259 MobiDBLite consensus disorder prediction 241 259 - -
Viun2g00845 259 Coils Coil 13 33 - -
Viun2g00845 259 PIRSF 14-3-3 1 248 IPR000308 -
Viun2g00845 259 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Viun2g00845 259 SMART 1433_4 7 249 IPR023410 -
Viun2g00845 259 Coils Coil 195 215 - -
Viun2g00845 259 FunFam 14-3-3 protein epsilon 2 249 - -
Viun2g00845 259 Gene3D - 1 249 IPR036815 -
Viun2g00845 259 MobiDBLite consensus disorder prediction 237 259 - -
Viun2g00845 259 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Viun2g00845 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Viun2g00845 259 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Viun2g00845 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Viun2g00845 259 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Viun2g00845 259 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Viun2g00845 259 Pfam 14-3-3 protein 13 235 IPR023410 -
Viun2g00845 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Viun2g00845 259 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Viun2g00845 259 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00845 Viun-Chr2 19121930 19125397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00845 2 253 14-3-3 family AT1G26480 86.111 3.79e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00845 - K06630 gmx:100529129 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00845 2 19121930 19125397 Viun2g00845 2 19121930 19125397 ECH