Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00841 ATGTTTTTCTCTCTGTCCATTGGTTCTTCTGCGGCATTGCCTTTGCCACTCAGATGCAACGCCAAAGTTGGTTCTCTTGATGCCTTCCCTTCCTTTCTCCCCAGAGAAGTGCACACCATTCAAGACCCTTTTGCCAGAAATTTCGCCATGCGGATTCAGAGGCTACCTGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCAATGGTGCAGAGCAAGGAAACTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTATTACCATTGCTTGAAGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCCTGTGATGTGGTATCAAAGCGTGATCACTTCTACCAGTTTTGGAAATACTACATCAGAAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCCGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTGGCAACCTTACCAAGAGCAGTAGCCTATGCCGGGGTTAATTTATTGAAGAGCTTTCCATTACGCCTTTATGCCACCTATTTGACCTTCACAAACATTTCCTTCAGCAATAGTCTTGATTGGACTAATGTTGGCCGATTGCATTGTTTATTGCCTTGGTGGAATGATGCTACAGTGGATTTTATGACAAGTGGTGGTTACAATGTGTCTCCTTTGATAGGAAAGGTAAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCGGTGCAACTCCACTGTGAATTACCTGATGCAACAATTCGCCAAATACCCCATTGTGGCCATCTTCCTCATCTGGAAAGACCAGACTCTACCATCAAATTAATTGTTGAATTTTTGCAGAGAGAGGCTAAGCAATTGGAACCATATGCTGCACAAGTATGA 1014 0.4349 MFFSLSIGSSAALPLPLRCNAKVGSLDAFPSFLPREVHTIQDPFARNFAMRIQRLPVPVRFSENPIMSSCVKPMVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKYYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSFPLRLYATYLTFTNISFSNSLDWTNVGRLHCLLPWWNDATVDFMTSGGYNVSPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDATIRQIPHCGHLPHLERPDSTIKLIVEFLQREAKQLEPYAAQV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00841 337 PRINTS Epoxide hydrolase signature 165 178 IPR000639 GO:0003824
Viun2g00841 337 PRINTS Epoxide hydrolase signature 106 121 IPR000639 GO:0003824
Viun2g00841 337 PRINTS Epoxide hydrolase signature 300 322 IPR000639 GO:0003824
Viun2g00841 337 PRINTS Epoxide hydrolase signature 86 104 IPR000639 GO:0003824
Viun2g00841 337 Pfam Alpha/beta hydrolase family 82 315 IPR000073 -
Viun2g00841 337 SUPERFAMILY alpha/beta-Hydrolases 80 325 IPR029058 -
Viun2g00841 337 PRINTS Alpha/beta hydrolase fold signature 151 164 IPR000073 -
Viun2g00841 337 PRINTS Alpha/beta hydrolase fold signature 269 283 IPR000073 -
Viun2g00841 337 PRINTS Alpha/beta hydrolase fold signature 106 121 IPR000073 -
Viun2g00841 337 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Viun2g00841 337 Gene3D alpha/beta hydrolase 72 331 IPR029058 -
Viun2g00841 337 PANTHER HYDROLASE 26 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00841 Viun-Chr2 19036409 19042673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00841 81 323 Acyl Lipid Metabolism Gene Families AT3G10840 24.051 1.16e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00841 - - gmx:100800197 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00841 2 19036409 19042673 Viun2g00841 2 19036409 19042673 ECH