Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00829 ATGGATGAAACACAAGATCAGTATTATTCTCCCAGTCTACCTGAGATTTCCTTGTCTCGCGATGGCAGTGAGAGGTCTTATTCCAATGCGCAAATAAATCGTGGGAGTGGGATATCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGATCTTGGATTAAAATTGGTCATGATGGGAATTTTGAGACAGTGAGACTTGACAAGGCAACTATAATGAGAAATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCAATGTTTATTTATCCTTCAGCAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATTCGATGTATAATCACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCCGAATTATGCAGTCGCCTTAAGAATGAAAAAGCTGATGATCTACCTTTTGAAATTAGGGCACTGGAGTTGGCTCTAGAATTGACATGCACATCTTTAGATGCTCAGGTAAACGAACTGGAAATGGAAATATATCCTGTGCTAGATGAACTAGCCTCATCTATCAGTACTTTAAATCTGGAACGTGTTAGGAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATTGAACATCTTATGGATGATGATGGTGACATGGCTGAGATGTGTCTAACGGAGAAAAAGAGAAGATCTGATACTTGCACTATTAATGATTGTTTTCAAACTAATGCATCTGGTGGATTGACTTCAAAGTCAGCTCCTGCTTCACCCGAGCGAACGACTAGTGGAGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCTAGCAAACCTGGTAGCTCAATGGTGTCTTCTGATAATGGGGAAAAGATTGAGCCACTCGAAATGTTGCTTGAAGCATATTTTGTAGTCATTGATAATACTCTTAACACACTATTATCGCTCAAAGAATACATTGACGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAGAACCAGCTAATACAGTTTGAGCTGCTTCTTACAGCTGCTACGTTGGTAGCTGCAGTATTTACTGCTGTAGCAGGTGTATTTGGAATGAACTTTGAAACCACAGTTTTTGACTATCCATCTGGATTCAATTTGGTTTTGGTAATTACTGGTATTGCTTGTATAGCATTGTATTTTGCTCTCCTATCTTATTTTAGGTACAAGAAAGTGCTTGCAACTTAA 1245 0.3968 MDETQDQYYSPSLPEISLSRDGSERSYSNAQINRGSGISGLKKRGHGSRSWIKIGHDGNFETVRLDKATIMRNCSLPSRDLRLLDPMFIYPSAILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCSRLKNEKADDLPFEIRALELALELTCTSLDAQVNELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRSDTCTINDCFQTNASGGLTSKSAPASPERTTSGVQMLQRAFSSIGNSSKPGSSMVSSDNGEKIEPLEMLLEAYFVVIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNQLIQFELLLTAATLVAAVFTAVAGVFGMNFETTVFDYPSGFNLVLVITGIACIALYFALLSYFRYKKVLAT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00829 414 Gene3D Magnesium transport protein CorA, transmembrane region 352 411 - -
Viun2g00829 414 Gene3D - 39 122 - -
Viun2g00829 414 Gene3D Magnesium transport protein CorA, transmembrane region 126 345 - -
Viun2g00829 414 FunFam Magnesium transporter MRS2-1 39 122 - -
Viun2g00829 414 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 402 IPR045863 -
Viun2g00829 414 CDD Mrs2_Mfm1p-like 51 411 IPR039204 -
Viun2g00829 414 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 29 412 IPR039204 -
Viun2g00829 414 Coils Coil 201 221 - -
Viun2g00829 414 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00829 Viun-Chr2 18974873 18982137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00829 1 412 MRS2 Gene Family AT2G03620 64.000 5.96e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00829 K16075 - gmx:100803935 716.457