Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00800 ATGGATCGGAGTTCTTTCCGGTCGGGAATGCGAAAATCCCATTCTAAACCCGACATTTACTCAACCTTCGTGGTTCACGACGACGAAGGCGATGACGACGACGGCGTAGAGACTAACCGCCGGCGGAAATCCGGCGGCGCGCAGCCGCGTGAGGATCCTTACGCGACCATGGTGTACAAAGACAACGGCCGCGACGACGACGACGACGACGAATATTCCTCTCTCCCTCCGCTACTCAAGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGCTGGACTACGATGACGATGATGACGATGCTGGCGACTTTGGCACCATGATCGTGAAGAGCGACCGTAGACGGAACAGCGATCGCCCTTCTTCCAGCTTGGCTTCGCCGCCGTGGAAGTCTCGGAGTTCGTCTCAGGCGAGTCCTCTGAATAGATTCGGCGAAGGGGAAGACGACGGCGATGAGGAAGAGGACAGCGGAGGATTCTCGACGTTCGTCGTTCGTTCGACGGTGAAGTCTGTCGAAAGAGAGGTTGTAAGCGGAACAGTTGTACGACGGTCCTCCGGCAGCAGCGGCGGCGTCGGTTCGACGATGGAGAGAGCGGTGGCGAGCATGCAGGGGATGGGAGATTTTGGATTCGGAAAGCAGAGGAAGGGAAGTGGATCTTCGCTGAACGACGAAGGAAGGCATCACTCGATAACGACGAAGGTTTCGACGAGTTCGATTCCTGAAAGTATTACCAGAGAGGACCCTACGATTAAATACGAATTGCTCAATGAACTTGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGGGATTTGAAAACCTCGGAGATGGTTGCTATCAAAGTGATATCGTTATCCGAAGGGGAGGAGGGGTATGAGGAAATCCGTGGTGAGATTGAAATGTTACAACAATGTAATCATCCTAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATTTAATGGGTGTGACTGACGAGTCATTGGATGAGGGTCAAATAGCATATATCTGTAGGGAAGCACTGAAGGGTCTTGATTATCTGCACTCAATTTTTAAAGTCCATAGAGACATCAAAGGTGGGAATATCTTATTAACTGAGCAGGGGGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACAAGGACCATGTCAAAGCGGAATACGTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATCCAGGAAAGTCGCTATGATGGAAAGGTTGATGTTTGGGCTCTTGGCGTGTCTGCTATTGAAATGGCTGAGGGTGTTCCTCCAAGATCTGACGTACATCCAATGAGGGTTTTATTCATGATATCAATTGAACCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTCTGTATTTCCATGATTTTGTTGCGAAGTGCCTAACTAAAGAACCTCGGCTCCGCCCTACTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAACTGGATCTGCTGCAATGTTGCCAAAATTAGAGAAGGCAAGGGAAATCAGGGCTTCAATGGCTTTGCAGGCGCAAACACTTGCTCCAGCAGAATCAGAAGATCAGTTAGTTTCAAAACCAAATGATGAATATGGAGACACTGTTCCATCCAAACCTCATAACATTGGTGTTGAGGGGGCTGCTAATCTGTCATCACATGGCACTGTGAGGAAGCTACGTGAGGTGGAAGATATAGACATGAGTGAAGGCAACTTTGGCACTGTTATAGTCCATGCTGATGAGTTTCATCAGAAGACTACACAATATGCTGATTCTGCAGTTTCCGACTCTGCTGTACCCAGTGGCACAGGAGGCAGATTGGCTAACTCTGGGATTGAGAATCAGAAAGTTGACTTGACGAAGACCACCTCCTTAAGAGAATCTAGTGCTACCACCAATACTATTCGATCATCTATACCTTATGCTAGTGATTCAACTGAGCAGACCCTCAAAATCAAAGGTAGTTATCGAGCACCAGCTGGAATGGGTAGTAGTGATATATTCAGGGGTGAAACCGGCAGCCGTAAAGCATTTGCTTTACAAGATAAGCTCTGGTCGATTTATGCTGCTGGTAATACTGTGCCTATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCTTGTCAGACAACGTACTTGGTGGCCTGCAACAGGATACTGCTGGAACCGGAACAGTGGAAGCACTGCAAGAGCTTTTCAGTGGTGATGGACAGTCCAAGAAGGGCCGCAGAGCACTAAATGAGCAGATGCCTCTTCCTCCAAGCATTTACCAAAGGTTGACATCAAGTTCTACACTTATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAGGATATGCCACTGCAAGAGCTGCAAGCGACCCAGGAGCAGCGGACTATTCAAAATCTCTCTGACACACTTCGAACCATACTTCGGTTGTAG 2508 0.4829 MDRSSFRSGMRKSHSKPDIYSTFVVHDDEGDDDDGVETNRRRKSGGAQPREDPYATMVYKDNGRDDDDDDEYSSLPPLLKRLPKDFGGGAPLDYDDDDDDAGDFGTMIVKSDRRRNSDRPSSSLASPPWKSRSSSQASPLNRFGEGEDDGDEEEDSGGFSTFVVRSTVKSVEREVVSGTVVRRSSGSSGGVGSTMERAVASMQGMGDFGFGKQRKGSGSSLNDEGRHHSITTKVSTSSIPESITREDPTIKYELLNELGKGSYGAVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMGVTDESLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAMLPKLEKAREIRASMALQAQTLAPAESEDQLVSKPNDEYGDTVPSKPHNIGVEGAANLSSHGTVRKLREVEDIDMSEGNFGTVIVHADEFHQKTTQYADSAVSDSAVPSGTGGRLANSGIENQKVDLTKTTSLRESSATTNTIRSSIPYASDSTEQTLKIKGSYRAPAGMGSSDIFRGETGSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQQDTAGTGTVEALQELFSGDGQSKKGRRALNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00800 835 MobiDBLite consensus disorder prediction 210 241 - -
Viun2g00800 835 CDD STKc_MAP4K3_like 251 506 - -
Viun2g00800 835 MobiDBLite consensus disorder prediction 1 161 - -
Viun2g00800 835 FunFam Aurora kinase A 244 333 - -
Viun2g00800 835 FunFam serine/threonine-protein kinase dst1 isoform X1 249 541 - -
Viun2g00800 835 SUPERFAMILY Protein kinase-like (PK-like) 251 507 IPR011009 -
Viun2g00800 835 SMART serkin_6 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00800 835 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 234 601 - -
Viun2g00800 835 MobiDBLite consensus disorder prediction 103 119 - -
Viun2g00800 835 Gene3D Transferase(Phosphotransferase) domain 1 249 544 - -
Viun2g00800 835 ProSiteProfiles Protein kinase domain profile. 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00800 835 MobiDBLite consensus disorder prediction 120 141 - -
Viun2g00800 835 ProSitePatterns Protein kinases ATP-binding region signature. 258 281 IPR017441 GO:0005524
Viun2g00800 835 Pfam Protein kinase domain 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00800 Viun-Chr2 18674587 18696354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00800 1 835 MAP Kinase Kinase Kinase Kinase AT1G69220 58.918 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Viun2g00800 Pkinase 4.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00800 - - gmx:100804995 1302.73