Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00788 ATGGAGTCACCCTTTGAATTTCGGGCATTGGAGATTAGTAGTCGAAATTTGGACAGAGTTGGTAAACTGAAGAGTGCAATGACAAGGTTGATTGCTAGAGTTCAGAAGCATGATACTAATGTTCCAATTGTTCAATCAGAGGAGCCCCCTTTTAAGGTTCAAAAAATTATAGGTGAGGAGTTTCATATTAATTCTTTGGAATGTGAAACAGGAAAGCGTCTTCAAATATGGGAATATCCAATGAGTCAAAGAGATGAGATTCAAATAGCTTATTTAAAATGGGGTCCATATCAAATGCAACTTGAAAACTATCCTTATTCTAAGGAAAAACATCCAAGGAGATTTCAATCTAGTTGGTTTAAAATGTTTCCTTCTTGGCTAGAGTATTCCCCGGCTAATGATGAAGCTTATTGTTTGGCATGTTATCTATTTAGTTCAAAGCCAGATGGTCATTTTGGATCAGATGTGTTTACTAAACAAGGTTTTAGATCATGGAGAAAGGTTAATGCAGGAAAAAGATGTGCATTTCTCAACCACATTGGAGATAGTCCTTGGTCACCGCATAACAATGCAATGAAAGCTTGTGAAGACTTGTTGAATCAATCTATGCACATTAATAACAATATAAATATTCAAAGTTCAGAACAAGTTTGCAAGAATTGTTTACGGCTCAAAACCTCTATTGACACAATTCGTTGGCTAGCATTTCAAGCTTGTGCATTTAAAGGCCACGAGGAAACACCAGAGTCAAGTAATAAAGGTAACTTTCTTGAAATGATTAAACTTCTAGCATCATATAATGATAAAGTGGCACAAGTTGTGTTAGAAAATGCTCCGTATAATGCTAAGAATACTTCTCATCATATTCAGAAAGAAATCTTGCACATTTTCTCTAGAAAAGTAAGAAGTCACATTCGAGAAGAAATTGGAGATTCTAAATTTTGCATAATTGTTGATGAAGCACGTGATGAATCTAAAAAAGAGCAAATGGCTATTGTTTTGAGATTCGTAGATAAGGATGGATATGATGGTGTTAGTAATATGATGGGAGAGTGGAATGGGTTGCAAGCATTATTTCTCAATGATAATCCTTATGCTTATTATGTGCATTGTTTTGCTCATAGACTACAACTTGCTTTGGTGGCTGCTTCAAGAGAGGTCATTCCAGTTCATCAACTTTTTTCAAATGTGGCTTTTATCGTAAATGTTGTGTATTCCTCTAGTAAACGTCATGATGAGTTACAAGCTATTGAATTAGATGGAATAACTCAATTGTTAGAAATGGGTGAACTTGAAACTGGTAAAGGAAAAAATCAAATTGGCACTTTAAAACGAGTTGGTGATACTCGTTGGAGCTCGCATTTTTATTCCATTTGTAGTATGATGAAGCTATATAATGCATCTTGTCTGGTTCTTCAAAAAATTATTGTTGATGGATCAACTTATTCTCAAAGGGGTGATGTTGATGCTGCATTGAATATGTTGTCTTCATTTGAGTTCATATTAATTTTACAATGA 1518 0.3465 MESPFEFRALEISSRNLDRVGKLKSAMTRLIARVQKHDTNVPIVQSEEPPFKVQKIIGEEFHINSLECETGKRLQIWEYPMSQRDEIQIAYLKWGPYQMQLENYPYSKEKHPRRFQSSWFKMFPSWLEYSPANDEAYCLACYLFSSKPDGHFGSDVFTKQGFRSWRKVNAGKRCAFLNHIGDSPWSPHNNAMKACEDLLNQSMHINNNINIQSSEQVCKNCLRLKTSIDTIRWLAFQACAFKGHEETPESSNKGNFLEMIKLLASYNDKVAQVVLENAPYNAKNTSHHIQKEILHIFSRKVRSHIREEIGDSKFCIIVDEARDESKKEQMAIVLRFVDKDGYDGVSNMMGEWNGLQALFLNDNPYAYYVHCFAHRLQLALVAASREVIPVHQLFSNVAFIVNVVYSSSKRHDELQAIELDGITQLLEMGELETGKGKNQIGTLKRVGDTRWSSHFYSICSMMKLYNASCLVLQKIIVDGSTYSQRGDVDAALNMLSSFEFILILQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00788 505 SUPERFAMILY Ribonuclease H-like 305 468 IPR012337 -
Viun2g00788 505 PANTHER - 66 504 - -
Viun2g00788 505 SMART 2118neu4 111 211 IPR006580 -
Viun2g00788 505 Pfam Domain of unknown function (DUF4371) 156 341 IPR025398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00788 Viun-Chr2 18526279 18530801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00788 2 36 MRS2 Gene Family AT5G64560 50.000 2.06e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00788 - - vun:114174546 1016.53