Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00787 ATGTTGACAGTGTTTTATTATGCTCTGGCTTTCACCATTTCTGCATTTTTTGCAGTGCTGAAATGGAACAGCTTAAGGTACTCCAGGAAAGGAATGCCTCCAGGGTCATTGGGTTGGCCTTTGGTAGGGGAGACTGTCAAATTTCTCACACAAGGACCAGATTTCATGAAAGGAAGAAAATTAAGATATGGAAGTCTGTTCAAAACTCATGCATTGGGATCTCCCACTGTTATTAGCATGGATCCTGACATGAATAGATACATACTCCTGAATGAAGCAAAAGGCTTGGTTCCTGGCTACCCAGACTCCATGAGGACGATCCTAGGGACTAACATTTCAGATGTTCATGGTGCAGTACACAAACGAATCAGAGGCTCACTCTTATCTCTCATTGGTCCAATCGCAGTTAAGGATCGTCTTCTCACAGAAGTTGATGACTTCATGACCTCATTCCTTGAAAATTGGGATGGTAAAACAGTTGATATTCAAGAAAAAACTGTTGAGATGTCATTTCTTGTTTCCATGAAAGCTGTGGTGGAAGATGAGCCAGACTCTTTCCTTCGGACCTTCAAAGCCTCATTTGATAAAATGGCACTGGCAACAATATCCTTGCCATTCAAAATTCCAGGAACTCAATATTATCGAGGTTTGAAGGCTAGGGAAAGAGTGATTACTATGCTAAGTGAGCTGATAGCCAAGAGAAGAGCTTCTTCAGCTACTCATAGCGACATTCTTGATCGTCTTCTGAGAAATGAGGATGGTAAATACAAGCTAAATGACGAAGAAATAATGGAGCAAATCACAACAATTTTATATTCAGGTTATGAAACAGTATCAACTACTACAATGATGGCCATCAAATACCTATGTGATAACCCTGATATTCTACAGACAGTAAGGGATGAGCATTTTGCAATCTTGCAGAAGAAAGTCCATGGAGAACGGATCAACTGGGATGACTACAAGAGCATGAGTGAAACTCGTGCGGTGATACTTGAGACAATGAGATTGGCTAGTGTTGTTAGTGGAGTGATGAGGAGGACTACTGAAGATTTAGAATTGAATGGTTATGTGATTCCCAAGGGATGGAGGGTTTATGCTTACACAAGGGATGGTAACTTTGATCCCATTCTCTATGAAGAACCTTTTACTTTTAATCCAAAGAGATGGCTGGAGAAAGGTTTGGAGAATCATAATCACAACATGCTATTTGGAGCAGGAGGCAGGGTGTGTCCTGGAAAGGAATGGGGCATGTTTAAAATCAGTATTTTCATTCACTATTTAGTCACTAGATACAGATGGGAAGAAGTAGAGGGAAGCAAGACACTTGCGAAATTTCCAAGAGTGTTGGCACCAGAAGGACTACACATGAAGATCACAAAATACTAG 1389 0.4082 MLTVFYYALAFTISAFFAVLKWNSLRYSRKGMPPGSLGWPLVGETVKFLTQGPDFMKGRKLRYGSLFKTHALGSPTVISMDPDMNRYILLNEAKGLVPGYPDSMRTILGTNISDVHGAVHKRIRGSLLSLIGPIAVKDRLLTEVDDFMTSFLENWDGKTVDIQEKTVEMSFLVSMKAVVEDEPDSFLRTFKASFDKMALATISLPFKIPGTQYYRGLKARERVITMLSELIAKRRASSATHSDILDRLLRNEDGKYKLNDEEIMEQITTILYSGYETVSTTTMMAIKYLCDNPDILQTVRDEHFAILQKKVHGERINWDDYKSMSETRAVILETMRLASVVSGVMRRTTEDLELNGYVIPKGWRVYAYTRDGNFDPILYEEPFTFNPKRWLEKGLENHNHNMLFGAGGRVCPGKEWGMFKISIFIHYLVTRYRWEEVEGSKTLAKFPRVLAPEGLHMKITKY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00787 462 CDD CYP90-like 59 461 - -
Viun2g00787 462 Pfam Cytochrome P450 33 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 Gene3D Cytochrome P450 23 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00787 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Viun2g00787 462 PANTHER CYTOCHROME P450 26 30 439 - -
Viun2g00787 462 SUPERFAMILY Cytochrome P450 25 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00787 Viun-Chr2 18514006 18519440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00787 80 462 Cytochrome P450 AT5G38970 52.208 5.63e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00787 K09590 - gmx:100818004 786.178