Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00766 ATGCAGAGAATTATGAACGCTGTCATATGTTCGGGTTACATTTTTATCTTGTATCTCATAAACCCACAACTAGTTGCAGTTGCTGATGATGGCAGTTATGTTCCTACAGAGAACATAGTTCTCAGCTGCGGCTCCAAAACATCAGAATTTGTGCAATATGATGGCCGGAATTGGAATGGTGACATTGTTTCACCGTATGTTCCCTCTGATGCTGACACCAAGTCTCAGGCAGTGAGAGCCCCTAACACTCTTCAATCCATTCCTGAAGTTCCCTATATGACTGCAAGGATCTTTCACTCTGAATTCACCTACACTTTCAATGTAACCCCAGGTCCCAAATTCATTCGTCTTCACTTCTACCCAGCTTCCTACATCAATCTCAACATCTCCAATGCTTTCTTATCAGTAAGTGCTGCTAACTTCACTCTTCTCCATAACTTCAGTGCTTCCCTCAACGCTGATTACTTCAACTTGGCCTATTTCATCAAAGAATTCATTGTGCATGTTAGTGGGAGTGTTTTACAACTCACTTTCTACCCATCATATAATTCCTCTTATGCCTTTGCATTTGTCAATGGGATTGAAGTCGTTTCAATGCCACTTAATTTATACACGATGGGTGGTGATGATGCTCCTCTTCCTTTAGTTGGCCACGATCAAGATGTTGTGAACATTTATAATGACTCTGCCATGGAAACCTTGTACAGATTGAATGTAGGAGGTGAGCAAATCTCACCCAAATATGACACGGGCATGTTTCGGAGTTGGGACACCGATGAAGTTTACTTTTTAGGGGGTAATGTTGAAGTTAGACCTTTTAATATGAGAATGCTGATTTTGTATTCTGATAATGCTCCACCATATTCAGCCCCAGCAGATGTCTACCGCATATCCCGCTCAATGGCTCCATTTCAAAATCCACTTATCACATTAAATTACAATATGACATGGTTTTTTCCCGTTGATTCTGGTTTCCTTTATCTTGTCAGGCTTCACTTCTGTGAAATTTATCAAGGTATAACAAAGATCAATCAGGTAGTTTTTACCGTATTTTTAAATAATCAAACAGCTGATGAACAATTTGATATAATTGCTTGGGGTGGGGAGCCCGGAGCTGCTGTACACCAAGACTACGTAGTGATGATTCCACATGTTAATGAAGGAAAGCAGGATTTGTGGCTTGATCTGCACCCATACAAGGATTCCAAACCCATGTACTATACTTCTTTCTTGAATGGTGTGGAGATCTTTAAACTTAGCAACTTCGGTGATAAGAGTCTTGCAGGACTAAACCCTCCCAAAAGCCTCTTGTCTGGAACAGCTGTAAAGGGTCCCCATGTTCCACATTTTAATAAAAGTTCTAAGAAACTCAAGTTCGTCCTCATTGGATGTGGACTTCTTGCAGTGGTGCTACCAATTCTCCTTTGCTTACTCCTATTCAGGTTAAAGGTGATCAACCTTAGAAGGGTCGTTTCATGGTGCGGTCTCACTGTGCACACACCTAATCGAATTGAAAAGGCAAAGAAGTGGTTACTGTGCACTCAATTTTCAATGCGAGAGATAAAATTGTGGACAAATGACTTCCATGAGGATTTACTTATAGGCAGTGGTGGATTTGGCAATGTTTACAAGGGTAGCTTCACTGGTGGCACAACTTACGTGGCCATTAAACGTGCCAATCTAATGTCAGAGCAAGGTGTTTCAGAATTTGAGACGGAGATCCTTTTGCTCTCACAACTTAGGCATCATAACCTGGTCTCACTTTTGGGTTATTGCAATGAGGATGGGGAGATGATATTGGTGTATGAGTTCATGGCCAATGGAAGTCTACATCATCATCTTCATCTGACGCAGAGAGATGAATCCCCTTTGGGTTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTGCACTACCTTCACACTGGCACAAAGCACAGGATCATCCACCGCGACATCAAGACAACAAACATACTCTTAGATCACAACTGGGTGCCCAAAATTTCAGATTTTGGGTTGTCAAAAGCAGGTTACCCTTCCTTAGTCACCACCAACGTGAAGGGTAGCATTGGTTACCTTGATCCCGAGTGCTATGAAAGGCACAAGTTGTCTGAGAAATCTGATATATACTCACTTGGGGTGGTGTTATTGGAGGTTCTCACTGCAAGGCCTGCTGTAAGTGTAGGTGAAGATGATGATGAGCATGTTAACTTGGCTGAATGGACTATGTCGTGCGTTGAGAATGGCAACGTGGAGCAAATAGTTGACCCCAAATTGAAAGAAAAGATAATAAAGGAGTGCTTTGAGTTATATTTAGGAGTTGCAATGAAATGTTTGGCTGAAAGAGGGGCGGAGAGGCCATCCATTGGTGAAGTGCTAGAGAACCTTGTTCTTGCAATGCATCTTCAGAAAAACGAAGGCAGTGTCTCAGATGGAAAAGATAATGCTGTTCTGCATGGTAATTCAGATTTGACACCTGGGGTTGAGTTCTCTGAAATCATGATGCCTGTTGCTCGGTGA 2529 0.4211 MQRIMNAVICSGYIFILYLINPQLVAVADDGSYVPTENIVLSCGSKTSEFVQYDGRNWNGDIVSPYVPSDADTKSQAVRAPNTLQSIPEVPYMTARIFHSEFTYTFNVTPGPKFIRLHFYPASYINLNISNAFLSVSAANFTLLHNFSASLNADYFNLAYFIKEFIVHVSGSVLQLTFYPSYNSSYAFAFVNGIEVVSMPLNLYTMGGDDAPLPLVGHDQDVVNIYNDSAMETLYRLNVGGEQISPKYDTGMFRSWDTDEVYFLGGNVEVRPFNMRMLILYSDNAPPYSAPADVYRISRSMAPFQNPLITLNYNMTWFFPVDSGFLYLVRLHFCEIYQGITKINQVVFTVFLNNQTADEQFDIIAWGGEPGAAVHQDYVVMIPHVNEGKQDLWLDLHPYKDSKPMYYTSFLNGVEIFKLSNFGDKSLAGLNPPKSLLSGTAVKGPHVPHFNKSSKKLKFVLIGCGLLAVVLPILLCLLLFRLKVINLRRVVSWCGLTVHTPNRIEKAKKWLLCTQFSMREIKLWTNDFHEDLLIGSGGFGNVYKGSFTGGTTYVAIKRANLMSEQGVSEFETEILLLSQLRHHNLVSLLGYCNEDGEMILVYEFMANGSLHHHLHLTQRDESPLGWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWVPKISDFGLSKAGYPSLVTTNVKGSIGYLDPECYERHKLSEKSDIYSLGVVLLEVLTARPAVSVGEDDDEHVNLAEWTMSCVENGNVEQIVDPKLKEKIIKECFELYLGVAMKCLAERGAERPSIGEVLENLVLAMHLQKNEGSVSDGKDNAVLHGNSDLTPGVEFSEIMMPVAR 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00766 842 SMART serkin_6 528 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00766 842 FunFam FERONIA receptor-like kinase 38 200 - -
Viun2g00766 842 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 605 807 - -
Viun2g00766 842 Gene3D - 229 420 - -
Viun2g00766 842 Gene3D - 39 200 - -
Viun2g00766 842 Gene3D Phosphorylase Kinase; domain 1 496 604 - -
Viun2g00766 842 CDD STKc_IRAK 534 799 - -
Viun2g00766 842 FunFam receptor-like protein kinase FERONIA 496 604 - -
Viun2g00766 842 Gene3D Transferase(Phosphotransferase) domain 1 605 822 - -
Viun2g00766 842 ProSiteProfiles Protein kinase domain profile. 528 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00766 842 PANTHER OS03G0124300 PROTEIN-RELATED 14 481 IPR046957 GO:0004672
Viun2g00766 842 SUPERFAMILY Protein kinase-like (PK-like) 513 801 IPR011009 -
Viun2g00766 842 Pfam Protein kinase domain 529 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00766 842 ProSitePatterns Protein kinases ATP-binding region signature. 534 557 IPR017441 GO:0005524
Viun2g00766 842 Pfam Malectin-like domain 41 418 IPR024788 -
Viun2g00766 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Viun2g00766 842 FunFam FERONIA receptor-like kinase 229 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00766 Viun-Chr2 17948949 17951659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00766 24 842 Receptor kinase-like Gene Family AT3G51550 46.756 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun2g00766 Malectin_like 6e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00766 - - gmx:100776859 1308.51