Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00765 ATGCAGAAAATTATGAACGCTATCATATGCTCTGGCTACATTTTTATCCTGTATCTCTTACACCTGCAACAAGTAGCAGTTGCTGATGATGGCAGTTATGTTCCTACAGAGAACATAGTTCTCAGCTGTGGCTCCAGCACATCAGAATTTGTGCAATATGATGGCAGGAAATGGAATGGAGATATTGCTTCACCGTATGTTCCCTCTGATGCTGACACCAAGTCTCAGGCAGTGAGATCTCCTAACACTCTTCAATCCATTCCTGAAGTTCTCTATATGACTGCAAGGATCTTTCACTCTGAATTCACCTACACTTTCAATGTAACCCCAGGTCCCAAATTCGTTCGCCTTCACTTCTACCCAGCTTCCTACATCAATCCCAACATCTCCAGTGCTTTCTTATCAGTAAGTGCTGCTAACTTCACTCTTCTCCATAACTTCAGCGCTTCCCTCAACGCTGATTACTTCAACTTGGCCTATTTCATCAAAGAATTCATTGTGCATGTTAGTGGGAGTGTTTTACAACTCACTTTCTCCCCATCATATAATTCCTCTCATGCCTTTGCATTCGTGAATGGGATTGAAGTCGTTTCAATGCCATTTAATTTATACACGATGGGTGGTGATGATGCTCCTCTTCCCTTAGTTGGACATAACAAGGTTGTGAACATTTATAATGACACTGCCATGGAGAACTTGCACAGATTGAATGTAGGAGGTGAGCAAATCCCACCCAAATATGACACCGGCATGTTTCGGACTTGGGACTCTGACGAAGTTTACATTTTAGGGGCTAATGTTGGTATTCAATTCTCTAATATGAGCATGCTGGTTTCGTATTCTGATAATGCTCCTCCATATTCATCCCCAGCAGATGTCTACCGGACATCCCGCTCAATGGCACCTTTTCTCGGTGGAATTGTAAATTTAAATTACAATTTGACATGGTTTTTTCCCATTGATTCAGGTTTCCTTTATCTGGTCAGGCTTCACTTTTGTGAAATTGATGAAGATATAACAAAGATCAATCAGGTAGTTTTTACCACATTTTTAAATAATCAAACAGCTGATGAACAATTTGATGTAATTGGTTGGGGTGGGAAGCCCGGCGCTGCTGTTCACAAAGACTATGTAGTAATGGTTCCACATGTTGATGAGGGAAAGCAGGATTTGTGGCTTGATCTGCACCCAAACAAGGATTCTAAACCCATGTACTATAATTCTTTCTTGAATGGTGTGGAGATCTTTAAACTCAGCAATTTTGGAGACAAGAGTCTTGCAGGGATAAACCCTTCCGAAAACTTAGTAAAGGCTCCCCATGTTGCACATTTTAATAAGAGTTCGAAGAAACTCAAATTCGTCCTCATTGGATGTGGACTTCTTGCAGTGGTGCTACCAATTCTCCTTTGCTTGCTCCTATTCAGGTTAAAGGTGATCAAGCTTAGAAGGGTCGTTTCATGGTGCGATCTCACTGTCCACACACCTGATCGAATTGAAAAGGCAAAAAAGTCGTCACTTTGCACTCAATTTTCAATGCAAGAGATAAAATTGGCGACAAATGACTTCCATGAGGATTTACTTATAGGCAGTGGTGGATTTGGCAATGTTTACAAGGGTAGCTTCACTGGTGGCACAACTTACGTGGCCATTAAACGTGCCAATCCAATGTCAGAGCAAGGTGTTTCAGAATTTGAGGCGGAGATCCTTTTGCTCTCACAACTTAGGCATCATAACCTGGTCTCACTTTTGGGTTATTGCAATGAGGATGGGGAGATGATATTGGTGTATGAGTTCATGGCCAATGGAAGTCTACATCATCATCTTCATCTGACGCAGAGAGATGAATCCCCTTTGGGTTGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGGGGTTTGCACTACCTTCACACTGGCACAAAGCACAGGATCATCCACCGCGACATCAAGACAACAAACATACTCTTAGATCACAACTGGGTGCCCAAAATTTCAGATTTTGGGTTGTCAAAAGCAGGTTACCCTTCCTTAGTCACCACCAACGTGAAGGGTAGCATTGGTTACCTTGATCCCGAGTGCTATGAAAGGCACAAGTTGTCTGAGAAATCTGATATATACTCACTTGGGGTGGTGTTATTGGAGGTTCTCACTGCAAGGCCTGCTGTAAGTGTAGGTGAAGATGATGATGAGCATGTTAACTTGGCTGAATGGACTATGTCGTGCGTTGAGAATGGCAACGTGGAGCAAATAGTTGACCCCAAATTGAAAGAAAAGATAATAAAGGAGTGCTTTGAGTTATATTTAGGAGTTGGAATGAAATGTTTGGCTGAAAGGGGTGCGGAGAGGCCATCCATTGGTGAAGTGCTAGAGAACCTTGTTCTTGCAATGCATCTTCAGAAAAATGAAGGCAGAGTCCAAAATGGAAATGAACGCATAAATGATAATGTTGTTCTGCTGGGTAATTCAGATTTGACACCCGGGGTTGAGTTCTCTGAAATCATGACGCCTATTGGTCGGTGA 2523 0.4233 MQKIMNAIICSGYIFILYLLHLQQVAVADDGSYVPTENIVLSCGSSTSEFVQYDGRKWNGDIASPYVPSDADTKSQAVRSPNTLQSIPEVLYMTARIFHSEFTYTFNVTPGPKFVRLHFYPASYINPNISSAFLSVSAANFTLLHNFSASLNADYFNLAYFIKEFIVHVSGSVLQLTFSPSYNSSHAFAFVNGIEVVSMPFNLYTMGGDDAPLPLVGHNKVVNIYNDTAMENLHRLNVGGEQIPPKYDTGMFRTWDSDEVYILGANVGIQFSNMSMLVSYSDNAPPYSSPADVYRTSRSMAPFLGGIVNLNYNLTWFFPIDSGFLYLVRLHFCEIDEDITKINQVVFTTFLNNQTADEQFDVIGWGGKPGAAVHKDYVVMVPHVDEGKQDLWLDLHPNKDSKPMYYNSFLNGVEIFKLSNFGDKSLAGINPSENLVKAPHVAHFNKSSKKLKFVLIGCGLLAVVLPILLCLLLFRLKVIKLRRVVSWCDLTVHTPDRIEKAKKSSLCTQFSMQEIKLATNDFHEDLLIGSGGFGNVYKGSFTGGTTYVAIKRANPMSEQGVSEFEAEILLLSQLRHHNLVSLLGYCNEDGEMILVYEFMANGSLHHHLHLTQRDESPLGWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTTNILLDHNWVPKISDFGLSKAGYPSLVTTNVKGSIGYLDPECYERHKLSEKSDIYSLGVVLLEVLTARPAVSVGEDDDEHVNLAEWTMSCVENGNVEQIVDPKLKEKIIKECFELYLGVGMKCLAERGAERPSIGEVLENLVLAMHLQKNEGRVQNGNERINDNVVLLGNSDLTPGVEFSEIMTPIGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00765 840 ProSiteProfiles Protein kinase domain profile. 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00765 840 Gene3D Transferase(Phosphotransferase) domain 1 599 818 - -
Viun2g00765 840 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 599 801 - -
Viun2g00765 840 FunFam FERONIA receptor-like kinase 228 419 - -
Viun2g00765 840 CDD STKc_IRAK 528 793 - -
Viun2g00765 840 Pfam Protein kinase domain 523 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00765 840 ProSitePatterns Protein kinases ATP-binding region signature. 528 551 IPR017441 GO:0005524
Viun2g00765 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Viun2g00765 840 SUPERFAMILY Protein kinase-like (PK-like) 507 796 IPR011009 -
Viun2g00765 840 Gene3D Phosphorylase Kinase; domain 1 487 598 - -
Viun2g00765 840 Gene3D - 39 200 - -
Viun2g00765 840 Gene3D - 228 419 - -
Viun2g00765 840 PANTHER OS03G0124300 PROTEIN-RELATED 13 478 IPR046957 GO:0004672
Viun2g00765 840 SMART serkin_6 522 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00765 840 FunFam FERONIA receptor-like kinase 38 200 - -
Viun2g00765 840 Pfam Malectin-like domain 41 417 IPR024788 -
Viun2g00765 840 FunFam receptor-like protein kinase FERONIA 489 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00765 Viun-Chr2 17927719 17930574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00765 25 840 Receptor kinase-like Gene Family AT3G51550 47.085 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun2g00765 Malectin_like 8.7e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00765 - - gmx:100776859 1280.77