Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00764 ATGATGGAATCCCACATGATAGATTCAAGTAGGAATGGCATCATCAGTTGTGTACTACTGCACCTCTTTTTGATTTTACCATTCATCCATTTAATCACTTGTGATCCCATTAGTGTCCCAGACAAAATCCTCCTAAACTGTGGTTCTTCTGAAGCATCATCATTCAATGGAGAGAATTGGATAGGAGATAGTGGATCTGATTTCTTGCCTCCAGAGTATGACAAGAGCTCATCCACAGTCTTGTTCTCAAACATGAACGACACTGTAGCACCAAAAGTTCCATACTCAACAGCAAGAATAACTCATTCTCCATTGACCTACTCCTTCCCTTCCTCCCCTGGCCTTAAATTCATTCGCCTTTACTTTCTCTCATCTTTATATCTGAAGACGAAACCCTACAACAAGGCTTATTTCTCTGTAAAAGCTGGGCCTTACACTCTTGTAAGTGATTTTAATCCATTTGATTTTGCAGAAGAGCTCAACTTGAAGTTTTTCTCCAAGGATTTTTTTGTCAATGTTAGGGAGGAAAAACTAATCATTACATTTACACCATCTCGTATAATTTCCAAAGCATTTGCTTTTATAAATGGCATTGAGATATTCCCAGTGCCCAAAAGCATATACTTTCCGAGTTCCAAGGTTCCTCTTCCTTACCTTGGGCACCAGCAAATGTTATTGACTAACGATGAATATGCTCTAGAGACGCTTTACAGAGTTAGCATTGAAAGTGATGAAACTAATTGTCCAAATGCTTTTGGAATATGGTTAGATGACTGTAGATACATATCTGGTTCACACTATGGAAGTGTCCTCAATATAAAGTCTCTTACTGTTAGCTTGAATTACACCACTTTATCTTCAAAGGATTACAATTATTCAGCACCAGGAGAGCTATATTGGACTGCCAGGACCATGGGAAGGAATGGAGATGCTAACATGAAGTACAATTTAACATGGTCTTTCCCTGTTGACTCTGGATTCAAATACCTTGTTAGACTCCATTTCTGTGAGATATCTGTAGAGGTAACGCAGCCGAACCAAAGGGTGTTCAAAGTGTACATAAACAACCAAACAGCAGAGGAGAGCATGGACGTAGTTGCTTCAGCCGGAGCACCATTTACTCCGTTGCACAAGGACTATGTTGTTATGGTTCCTACGGAAAGTGGGAGGAGGAAAGATTTGTGGATCTCACTTCACCCTAACCTGAAGTCAAAACCAAACTATGCTGATGCCATACTGAATGGAATTGAGATCATGAAGATAAGTGATAGTAATCATAGTCTTGCAGCAATGTTCCAATTGATAATGGAAAAAAGAAAGAAGAAAGTTCAACATGTCATCATTGTGGCTGCTGCCACTTTAGGTACTATCTTCGGACTGCTCTTCACACTTTTCATTCTTATCCACAGAGCAGGGAAAAAATTGAAGTGGAGAACTTCTCATATTCTCCCATCAAATTCTAGTAGTACTCACAAAAACACTCAACCCACAGTAACCTCAGATCTTTGCCATCAATTCACACTTGAAGAAATCAGCATAGCTACAAGCAACTTCAGTGAAGATCTTGTCATCGGGGAGGGAGGCTTCGGAAAGGTGTACAAAGGCATCATGCATCATGATGGAGTTACAGCTGTTGCAGTAAAGCGCTCTAATCGTAGATCTGGTCAAGGATATAAAGAGTTTCAAAATGAGATCAACTTTTTCTCATTCTGTCATATGAATCTAGTGTCACTGCTGGGATACTGCCAAGAGGGAAATGAGCTGATACTTGTGTATGAATACATGGTTGAGGGTCCTCTCTCTGACCACTTATACAAGAAAAGAAAACAGCCATTGTCTTGGATTCAAAGAATAAAGATTTGTATTGGTGCAGCTCGAGGACTACATTACCTCCACACTAGCACAAGGCACCCAGTGATTCACCGTGATGTGAAGTCAGCCAACATATTATTGGATCAGAATTTGGTAGCCAAGATTGCTGATTTTGGATTGTGTAGAACAGTTCCGTCACTATACGACTCACATGTAAGCACTGAGGTTAAAGGTACTTTGGGATATTTAGACCCAGAGTACTATAAGAGAAGAAAACTGACTCAAAAATCGGATGTGTATTCATTTGGAGTGGTTTTGTTTGAGGTGTTGTGTGGAAGAGCAGCTGTGAATCCAGTGGCAGTGGAAGAGGAAAGTGAGAAAGTTGGGTTGGCAACATGGGCCATGCAGTGTTACAAGTGTGGAAGCATTGATGAATTAGTTGATCCTCATTTAGCAGGTAATGTTAGGCCACAATGCCTGATGGCGTTTGTGGACTTAGGCATCCAATGTTTGGCTGATAGAAGTGCAGATAGGCCAACTATGGGAGAGGTCCTCAATACTTTAGAGAGAATCCTTTCCTTGCAGGATAGTTTAGAGGAACAAGAACCTAACACAACTCAGTTTCTACAATAG 2445 0.4053 MMESHMIDSSRNGIISCVLLHLFLILPFIHLITCDPISVPDKILLNCGSSEASSFNGENWIGDSGSDFLPPEYDKSSSTVLFSNMNDTVAPKVPYSTARITHSPLTYSFPSSPGLKFIRLYFLSSLYLKTKPYNKAYFSVKAGPYTLVSDFNPFDFAEELNLKFFSKDFFVNVREEKLIITFTPSRIISKAFAFINGIEIFPVPKSIYFPSSKVPLPYLGHQQMLLTNDEYALETLYRVSIESDETNCPNAFGIWLDDCRYISGSHYGSVLNIKSLTVSLNYTTLSSKDYNYSAPGELYWTARTMGRNGDANMKYNLTWSFPVDSGFKYLVRLHFCEISVEVTQPNQRVFKVYINNQTAEESMDVVASAGAPFTPLHKDYVVMVPTESGRRKDLWISLHPNLKSKPNYADAILNGIEIMKISDSNHSLAAMFQLIMEKRKKKVQHVIIVAAATLGTIFGLLFTLFILIHRAGKKLKWRTSHILPSNSSSTHKNTQPTVTSDLCHQFTLEEISIATSNFSEDLVIGEGGFGKVYKGIMHHDGVTAVAVKRSNRRSGQGYKEFQNEINFFSFCHMNLVSLLGYCQEGNELILVYEYMVEGPLSDHLYKKRKQPLSWIQRIKICIGAARGLHYLHTSTRHPVIHRDVKSANILLDQNLVAKIADFGLCRTVPSLYDSHVSTEVKGTLGYLDPEYYKRRKLTQKSDVYSFGVVLFEVLCGRAAVNPVAVEEESEKVGLATWAMQCYKCGSIDELVDPHLAGNVRPQCLMAFVDLGIQCLADRSADRPTMGEVLNTLERILSLQDSLEEQEPNTTQFLQ 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00764 814 ProSitePatterns Protein kinases ATP-binding region signature. 524 548 IPR017441 GO:0005524
Viun2g00764 814 CDD STKc_IRAK 524 795 - -
Viun2g00764 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Viun2g00764 814 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Viun2g00764 814 ProSiteProfiles Protein kinase domain profile. 518 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00764 814 SUPERFAMILY Protein kinase-like (PK-like) 489 792 IPR011009 -
Viun2g00764 814 FunFam FERONIA receptor-like kinase 42 204 - -
Viun2g00764 814 Gene3D Transferase(Phosphotransferase) domain 1 595 812 - -
Viun2g00764 814 SMART serkin_6 518 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00764 814 PANTHER OS03G0124300 PROTEIN-RELATED 18 478 IPR046957 GO:0004672
Viun2g00764 814 Pfam Protein tyrosine and serine/threonine kinase 523 791 IPR001245 GO:0004672|GO:0006468
Viun2g00764 814 FunFam FERONIA receptor-like kinase 231 422 - -
Viun2g00764 814 FunFam Receptor-like protein kinase FERONIA 595 813 - -
Viun2g00764 814 Pfam Malectin-like domain 45 421 IPR024788 -
Viun2g00764 814 Gene3D - 233 422 - -
Viun2g00764 814 Gene3D - 43 203 - -
Viun2g00764 814 FunFam receptor-like protein kinase FERONIA 481 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00764 Viun-Chr2 17923980 17926662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00764 31 805 Receptor kinase-like Gene Family AT3G51550 43.033 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun2g00764 Malectin_like 7.2e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00764 - - gmx:100776324 1221.45