Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00692 ATGGGCAATGGACTTTTGAAGAATAAATCTTCGGGAAGGGACATGCGGCATGGTGGGGAATATGAATGTTTTAAGGGAAATGAAACACATAACGGTTATTGTGATGACGAGGACGTAGAGTTGGAGGGACAGAATGTTGGTTACTATATAATCTCTTCCTCAGAAAGTGGAGGAGAGAAATATAGAAGATCAAGAAGGTCATGTTCTCGTGATAGATATAGAAGTCCATCAAGATCAAATGGTCGTGCCAAGGACGGGTCTCGTTCTGGAAGTATAGCAGAAAAACATGCTCATTCAAAGAGAAGGCACCCTGATGAACAGGGGGGGCTTTCATATTGTGGTAGACTGGAGACTTACTACGGCCTTGATGATGAAGGAATGATGGCAAGCAGATGGGAGAATAGGGATTTGGTGGACAAAAGAAGCGAACACAGAGCAAGTTATCATGTTGTGGAGGCTCGGGATAGGGGTAGGGATAGGAATAGGAGTAGGGACAAAGATGTCAAGAGAGACTTAAAGATGGAAAAAGAACAAGAGAGTTGGGTGTTTAGAAGGGAGAAAGAACATGAAAGGAGCCATGAGAGGCACAAAAGGAATGGAGAAGAAGAGAGGAGGCAGAGAGAGGATTATAGGGACAGGAGAAGAGAAAAGGAAGTAGATAGGAGCTGTGAGACAGTGTTTGAGAGGGATAGGAGAAGGGAAAAGGAAAGATATCGAAGTAGAGAGAGAACAAGGGGTGATGAGAGAGATAGGGAGCGGGAGACTGCTGAACATGATGATAAGGGTTGGGAAAGAGATAAAATTAAGGAGAGGGAGAAGCGAGAGGATAGAGAGAGGCGCACAGGCAGAGACACTTTGAATTGCATGGGTAAGTATCTGCCTCATGAAGATGATTATGATAGTCGTGATAGGCATAAAATGCAGACAAAACAAGAAGAAATAGAAGACCACCAAAAAAGTAAAAAGAACTCCTTGCCTGTAATGGTTTATGATGAAAACAAACTACAAAGAAGGGAGGATGAACAAGATGAGTTAGATGAGAAGGTTACATTGCAATCACCTGATCAAGAAGAAGAACATTTCAATAGGGTTAAAGAAGAGAGTAGAAGGAGAAGGGAGGCAATCTTAGAGAAATACAAGAAGCAGCAGCAACAAGTGCAACAAAATACAGAAAACAAAATAAAAGAGATTCCTCCTACCGTTCCTGATGTTCTCGATGATGTGGAAGTGGAAACATTATTCTCAGTCAGGAAATCTCCTCTGGTAAATGGGGTCGTTGCTTCTAATATGATCTCTTGCTCTGGGGCCCTTAGAGAGGGTACACCAAAGAGTAAAGAAGCTGATGACGAATTTTGTGATGATATATTTGGTGAGACACCAACTGGAGCTCAGAAATCAGGTAAAGGAGAAGGTTTAAGAATTGAGAATGGTGGCCTACATGATAATTGGGATGATGCAGAGGGTTATTACAGTTATCGATTTGGTGAAATACTTGATGGCCGGTATGAAGTCATTGCTGCTCATGGGAGAGGTGTCTTTTCAACAGTAGTCCGGGCAAAGAATCTTAAAAGTATTAGTGGTGAACCTGGAGAAGTTGCCATAAAAATAATTCGTAGTAATGACACAATGTACAAGGCTGGTATGGATGAATTGGTTATATTAAAGAAATTAGTAGGTGCTGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCTAGTTTCAAGTACAGGAATCACCTCTGTTTAGTTTTTGAATCTCTCCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACTGCAGTTAGAGTGTATGCTAAACAACTTTTTATTGCACTGAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTGAATGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACGCCATATCTAGTGAGTCGCTTTTATCGTGCCCCTGAAATCATACTTGGTTTAACCTATGATCATCCATTGGATATGTGGTCTGTAGGATGTTGTTTGTATGAGCTCTATACAGGGAAAGTTCTTTTTCCAGGTTCTACAAACAATGACATGCTACGGCTCCATATGGAACTGAAGGGCCTTTTTCCTAAAAAGATGCTTCGGAAGGGAGCATTTATTGAACAGCATTTTGATCAGGACCTGAATTTTCTTGCTACAGAGGAGGACCCTGTGACAAAAAAGGCAATAAAGCGGATGATTAGCCAATTTCAAGGATCTTCTCGAAAAGGTTTTTGTATTGGATCCAGACAAGAGGTTGACAGTCTCACAGGCATTGAATCACCCGTTCATCACTGGCAAGTGAACAATGTGCTGATTTTGACTACCAAAATGATGTTCACTGATTTCTGTACATAG 2448 0.4109 MGNGLLKNKSSGRDMRHGGEYECFKGNETHNGYCDDEDVELEGQNVGYYIISSSESGGEKYRRSRRSCSRDRYRSPSRSNGRAKDGSRSGSIAEKHAHSKRRHPDEQGGLSYCGRLETYYGLDDEGMMASRWENRDLVDKRSEHRASYHVVEARDRGRDRNRSRDKDVKRDLKMEKEQESWVFRREKEHERSHERHKRNGEEERRQREDYRDRRREKEVDRSCETVFERDRRREKERYRSRERTRGDERDRERETAEHDDKGWERDKIKEREKREDRERRTGRDTLNCMGKYLPHEDDYDSRDRHKMQTKQEEIEDHQKSKKNSLPVMVYDENKLQRREDEQDELDEKVTLQSPDQEEEHFNRVKEESRRRREAILEKYKKQQQQVQQNTENKIKEIPPTVPDVLDDVEVETLFSVRKSPLVNGVVASNMISCSGALREGTPKSKEADDEFCDDIFGETPTGAQKSGKGEGLRIENGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGRGVFSTVVRAKNLKSISGEPGEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRVYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLTYDHPLDMWSVGCCLYELYTGKVLFPGSTNNDMLRLHMELKGLFPKKMLRKGAFIEQHFDQDLNFLATEEDPVTKKAIKRMISQFQGSSRKGFCIGSRQEVDSLTGIESPVHHWQVNNVLILTTKMMFTDFCT 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00692 815 Gene3D Transferase(Phosphotransferase) domain 1 562 795 - -
Viun2g00692 815 Gene3D Phosphorylase Kinase; domain 1 472 561 - -
Viun2g00692 815 MobiDBLite consensus disorder prediction 234 369 - -
Viun2g00692 815 SMART serkin_6 502 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00692 815 FunFam Serine/threonine-protein kinase PRP4 homolog 562 787 - -
Viun2g00692 815 MobiDBLite consensus disorder prediction 52 112 - -
Viun2g00692 815 SUPERFAMILY Protein kinase-like (PK-like) 489 749 IPR011009 -
Viun2g00692 815 MobiDBLite consensus disorder prediction 234 322 - -
Viun2g00692 815 Pfam Protein kinase domain 503 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00692 815 MobiDBLite consensus disorder prediction 58 81 - -
Viun2g00692 815 PANTHER DUAL SPECIFICITY PROTEIN KINASE 231 761 - -
Viun2g00692 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Viun2g00692 815 MobiDBLite consensus disorder prediction 88 108 - -
Viun2g00692 815 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00692 815 MobiDBLite consensus disorder prediction 152 215 - -
Viun2g00692 815 MobiDBLite consensus disorder prediction 332 369 - -
Viun2g00692 815 Coils Coil 365 396 - -
Viun2g00692 815 MobiDBLite consensus disorder prediction 1 22 - -
Viun2g00692 815 CDD STKc_PRP4 501 768 IPR044092 GO:0004674|GO:0006468|GO:0045292
Viun2g00692 815 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00692 Viun-Chr2 16541298 16556272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00692 509 724 MAP Kinase Gene Family AT2G46070 35.294 7.12e-22 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Viun2g00692 Pkinase 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00692 K08827 - gmx:100776908 839.336