Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00676 ATGGTTGCCGTTGTTTGTGTTGTTGCTGAACTCACTGTAACTGCTCGTTCAGGGAGGCTCGAAACTGGGAATTGTTCAATGGGAAAAGAGATTTCCGATTCTGATTCCCATCACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAAAGAAAAGACTGTGATCGCCATGAGATTGCTCCAATCCAAGACCAGCTATCCTTTGAGAAGGGTTTTTTCATTGTAATTCGTGCATGCCAATTGTTGGCACAAAAGAATGATGGAATAGTATTGGTAGGGGTGGCAGGTCCTTCTGGAGCAGGCAAGACTGTATTTACTGAAAAGATACTCAACTTCATGCCCAGTATTGCTGTCATTTCAATGGATAATTACAATGATTCCAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACAGATTACGACACGTTACTTCAGAATTTACATGATTTAAAGGAAGGAAAGCCTGTTCAAGTTCCCGTATATGATTTCAAGTCCAGTTCACGAATAGGATACAGGACAGTAGAGGCTCCAACTTCTCGTATCGTGTTTATAGAGGGCATCTATGCCTTGAGTGAAAAGTTACGACCTTTACTGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATTCAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTGTATCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAAACAGCACACATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCAACTTACATATTAAAGTCAGCAAAGAATCTAGCAGTGGATCAAATTAAAGCTGTTCTCTCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACTTGCCAATCGTATCTGCGAATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCCTTGGGATACACAATAGCCACTATCCTTAAGAGAAACAGCCATGTTTTTTCTGATGATAGGGTTTGTGTGAAACTCGATTGGCTTGAGCAACTCAATAGACATTATGTTCAGGTACAAGGAAGAGATCGCTTGGTTTTAAAATACATAGGACAGCAGCTAGGTTTAGATGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTGGACGAGGTTATGGCCCTACCAGAGGATTTGAAGACAAAACTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGAATATCACAGTCATATACCAATCAAAGAGACAAAAACCTTGCTAAGGTTACTGGATATGATTCCAACAATAGAAGGTTTGTTGAAAGAAATTCAGAGTCCAGCACAATGGCGCTGAATCAGGGAGCCATCAATCAACTTTCGGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATTGAAGAGCTGAATTCCAAATTAAACACCAAGAGAAATTCTCCAAGCCAACAGAATATGTCACTTCAAACTGAGACATGCAATGGATCAGCTCCCACCTCATACTTCATCACTAGTTTGGGCAATGGTTCCTTAACTGGATCTAAAATGGCAAATTCCTCTTCATCATCACAGTTAACTAAGGATTCTCCTTTAATGGATGAGATATCAAGCATTGCACGCAGTCAGCGTCAGATCATGCATCAATTGGACAATCTGAATAATCTTCTCAGGGGTAGCTCAGGGGAGAAGTCTCACCAAACAAGAACTAACCGGAGAAGCATAGATACGACATCAGATACCATGGGAACCTCTGTTATGGCAGTGGTGGCAGTTGGTTTTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAACCGAAATTGA 2070 0.4087 MVAVVCVVAELTVTARSGRLETGNCSMGKEISDSDSHHKRLGLLKDQVHLVKRKDCDRHEIAPIQDQLSFEKGFFIVIRACQLLAQKNDGIVLVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVQVPVYDFKSSSRIGYRTVEAPTSRIVFIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSAKNLAVDQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGQQLGLDGSYIPRTYIEQIQIEKLVDEVMALPEDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGISQSYTNQRDKNLAKVTGYDSNNRRFVERNSESSTMALNQGAINQLSDQISALNDRMDEFTNRIEELNSKLNTKRNSPSQQNMSLQTETCNGSAPTSYFITSLGNGSLTGSKMANSSSSSQLTKDSPLMDEISSIARSQRQIMHQLDNLNNLLRGSSGEKSHQTRTNRRSIDTTSDTMGTSVMAVVAVGFLGIFLMKGLLNRN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00676 689 MobiDBLite consensus disorder prediction 558 577 - -
Viun2g00676 689 Coils Coil 529 563 - -
Viun2g00676 689 Gene3D - 92 294 IPR027417 -
Viun2g00676 689 Pfam CYTH domain 279 430 IPR023577 -
Viun2g00676 689 MobiDBLite consensus disorder prediction 639 661 - -
Viun2g00676 689 Pfam Phosphoribulokinase / Uridine kinase family 94 262 IPR006083 GO:0005524|GO:0016301
Viun2g00676 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 262 IPR027417 -
Viun2g00676 689 CDD UMPK_like 93 265 - -
Viun2g00676 689 ProSiteProfiles CYTH domain profile. 274 436 IPR023577 -
Viun2g00676 689 SUPERFAMILY CYTH-like phosphatases 293 433 IPR033469 -
Viun2g00676 689 PRINTS Uridine kinase signature 91 108 - -
Viun2g00676 689 PRINTS Uridine kinase signature 158 173 - -
Viun2g00676 689 PRINTS Uridine kinase signature 214 224 - -
Viun2g00676 689 PRINTS Uridine kinase signature 250 263 - -
Viun2g00676 689 PANTHER URIDINE KINASE 44 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00676 Viun-Chr2 16369434 16382042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00676 93 262 PRT Gene Family AT5G40870 27.624 1.95e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00676 K00876 - gmx:100797542 1183.7