Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00659 ATGGTCCCTAGTGAGATAAGAGGAGTCCACTTTCTAGCACCTGAAAACCCATTCCTAGTTCCACCAAACTTTGGCCTTCTGCAAAGTGACATTCCAAACATCCACATGAACACCCTCCTAAGCAACTTTCCAAACTGCCACTTCCCTCCTTCGGGCTCTTGCATCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATCCACTTTAACATCATCGACGAAAGGAAACACAGGAGAATGATATCCAACCGAGAATCCGCCCGCAGATCAAGGATGAGGAAACAAAAACACTTGGATGAACTTTGGTCGCAGGTTGTTCGGCTCAGAACTGAGAACCACAATTTGATTGACAAACTTAACCATATGTCCGAGTCCCATGACAGAGTCCTCCAAGAGAACACACGCCTCAAGGAAGAAGCTTCTGATCTCCGCCAAATGCTAGCAGACATGCAAATCGGAACCTCCTTTGCTTGCTCCATCGAACAATTCCACGACCTTCCTTGCAACAAACCTGATCCTTCAAACCAATCGATCACTCCTGCAGACATGATTCATGAATGA 561 0.4635 MVPSEIRGVHFLAPENPFLVPPNFGLLQSDIPNIHMNTLLSNFPNCHFPPSGSCISSNSTSDEADEIHFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSESHDRVLQENTRLKEEASDLRQMLADMQIGTSFACSIEQFHDLPCNKPDPSNQSITPADMIHE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00659 186 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Viun2g00659 186 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Viun2g00659 186 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 35 155 IPR044521 -
Viun2g00659 186 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Viun2g00659 186 Pfam bZIP transcription factor 75 133 IPR004827 GO:0003700|GO:0006355
Viun2g00659 186 FunFam BZIP transcription factor 73 124 - -
Viun2g00659 186 SUPERFAMILY Leucine zipper domain 75 125 IPR046347 GO:0003700|GO:0006355
Viun2g00659 186 Gene3D - 73 128 - -
Viun2g00659 186 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Viun2g00659 186 Coils Coil 119 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00659 Viun-Chr2 16236914 16237943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00659 49 158 bZIP Transcription Factor Family AT3G30530 68.750 3.10e-48 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g00659 bZIP_1 5.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00659 - - gmx:778126 343.199