Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00601 ATGGCAGTGGAATATGAAATTGAGCATCCAAGGAAGGCTTTTGGATGGGCAGCTAGGGATACATCTGGTCTTCTCTCCCCATTTTTCTTCTCCAGGAGAAAAACAGGTGAAAAAGATGTGACATTCAAGGTGTTGTACTGCGGGATATGTCACTCTGACCTTCACAAGTTGAAGAATGAATGGAGTGACTCCATTTATCCACTTGTTCCTGGGCGTGAGATTGTTGGAGAAGTGATAGAGGTGGGAAGCAAAGTAGAAAAGTTTAAGGTTGGAGACAAGGTAGCAGTGGGATGTTTGGTTGGGTCTTGTTCCTCATGCCAAAACTGTGTCAACAATCTTGAGAATTATTGCCGGCAAGCGATTCCCACATATGGTGCCAAGAATGTGGATGGCAGCATCACATATGGAGGATTCTCTGACTTCATGGTTGCAGATGAACACTTTGTTGTCAACATTCCAAATGGCCTACCACTTGACGTTGTTGCTCCTCTCCTTTGTGCAGGGATCACAGTGTATAGTCCTTTGAGATATTTTGGCCTTGACAAACCTGACATGCACCTAGGAGTGGTTGGCCTTGGTGGATTGGGTCATTTGGCTGTCAAGTTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATTAGTACCTCTCCTAGTAAGGAACAAGAAGCCATTCAACATCTTGGAGCAGATTCCTTTGTGCTTAGTAGAGACCAAGATCAAATGAAGGCTGCAATGTGCACCTTGGATGGTATAATCGACACTGTTTCCGCAGTCCATCCTATCATACCCTTGATTGATCTATTGAAGTCTCATGGGAAGCTAGTGACGGTTGGGGCACCAGAGAAGCCTCTCGACTTGCTACTTCCATCTTTAATTATGGGGAGAAAAAGTATAGTGGGGAGTTACATCGGAGGAATCCAGGAGACACAAGAAATGATTGATTTCGCATCCGAACACAATGTTAGACCTGAAATTGAGGTAATTCCGATGGATTATGTGAACACAGCAATGGAGCGTCTACTCAAAGCTGATGTTAAATATCGCTTTGTCATTGACATTGGGAACACACTGAAGCCCTACCCTTCCATTACTTTGGAGTGA 1101 0.445 MAVEYEIEHPRKAFGWAARDTSGLLSPFFFSRRKTGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLVPGREIVGEVIEVGSKVEKFKVGDKVAVGCLVGSCSSCQNCVNNLENYCRQAIPTYGAKNVDGSITYGGFSDFMVADEHFVVNIPNGLPLDVVAPLLCAGITVYSPLRYFGLDKPDMHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPSKEQEAIQHLGADSFVLSRDQDQMKAAMCTLDGIIDTVSAVHPIIPLIDLLKSHGKLVTVGAPEKPLDLLLPSLIMGRKSIVGSYIGGIQETQEMIDFASEHNVRPEIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKPYPSITLE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00601 366 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Viun2g00601 366 CDD CAD1 14 352 IPR047109 GO:0016616
Viun2g00601 366 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Viun2g00601 366 SUPERFAMILY GroES-like 9 199 IPR011032 -
Viun2g00601 366 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Viun2g00601 366 Gene3D - 16 353 - -
Viun2g00601 366 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Viun2g00601 366 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Viun2g00601 366 Gene3D - 167 323 - -
Viun2g00601 366 FunFam Uncharacterized protein 16 166 - -
Viun2g00601 366 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Viun2g00601 366 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00601 Viun-Chr2 14703985 14707221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00601 11 363 Monolignol Biosynthesis Gene Families AT4G37990 67.422 3.66e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00601 K23232 - gmx:100812491 659.833