Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00600 ATGATGGATTACAGACGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTGGAAAAGTTTAAGGTTGGAGACAAGGTGGCCGTGGGATGCTTGGTTGGGTCTTGTTCCTCATGCCAAAACTGTGTCAACAATCTTGAGAATTACTGCCAGCAAGGGATTCCCACATATGGTGGGAAGTATGTGGATGGAAGCATCACGTATGGGGGATTCTCTGACTTCATGGTTGCAGATGAACACTTTGTTGTCAACATTCCAAATGGCCTACCACTTGATGCTGCTGCTCCTCTCCTCTGTGCAGGGATCACAGTGTATAGTCCTTTGAGATATTTTGGCATTGACAAACCTGGTATGCACCTGGGAGTGGTTGGCCTTGGTGGATTGGGTCATTTGGCTGTCAAGTTTGCAAAGGCCCTTGGCTTGAAGGTCACTGTCATTAGTACCTCTCCTAATAAGAAACAAGAAGCCATTCAACATCTTGGAGCAGATTCCTTTGTGCTCAGTACAGACCAAGATCAAATGAAGGCTGCAATGTGCACCTTGGATGGTATAATTGACACTGTTTATGCAGTTCATCCTCTCATGCCCTTAATTGATCTGTTGAAGTCTCACGGGAAGTTAGTGACGGTTGGGGTGCCACTAAAGCCTGTGGAGTTGCTACTCCCGTCTTTGGTTTTAGGAAGAAGAAGTGTAGCGGGTAGTTACTTTGGAGGAATAAAGGAGACACAAGAAATGATGGATTTCGCTGCAGAACACAATGTTAGACCTGAAATTGAGATAATTCCTATGGATTATGTTAACACAGCAATGGAGCGTCTACTCAAAGCCGATGTTAAGTATCGATTTGTTATTGACGTTGGGAACACATTGAAGTCTTACCCTTCTACTACTTTGGAGTGA 903 0.4463 MMDYRREIVGEVTEVGSKVEKFKVGDKVAVGCLVGSCSSCQNCVNNLENYCQQGIPTYGGKYVDGSITYGGFSDFMVADEHFVVNIPNGLPLDAAAPLLCAGITVYSPLRYFGIDKPGMHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPNKKQEAIQHLGADSFVLSTDQDQMKAAMCTLDGIIDTVYAVHPLMPLIDLLKSHGKLVTVGVPLKPVELLLPSLVLGRRSVAGSYFGGIKETQEMMDFAAEHNVRPEIEIIPMDYVNTAMERLLKADVKYRFVIDVGNTLKSYPSTTLE 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00600 300 SUPERFAMILY GroES-like 7 118 IPR011032 -
Viun2g00600 300 Gene3D - 101 257 - -
Viun2g00600 300 FunFam Putative cinnamyl alcohol dehydrogenase 6 258 287 - -
Viun2g00600 300 Gene3D - 7 287 - -
Viun2g00600 300 Pfam Alcohol dehydrogenase GroES-like domain 7 85 IPR013154 -
Viun2g00600 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 90 255 IPR036291 -
Viun2g00600 300 PANTHER ALDEHYDE REDUCTASE 6 290 IPR047109 GO:0016616
Viun2g00600 300 Pfam Zinc-binding dehydrogenase 128 251 IPR013149 -
Viun2g00600 300 CDD CAD1 7 286 IPR047109 GO:0016616
Viun2g00600 300 FunFam Cinnamyl alcohol dehydrogenase 101 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00600 Viun-Chr2 14668680 14671338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00600 6 296 Monolignol Biosynthesis Gene Families AT4G37990 65.979 6.57e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00600 K23232 - gmx:100812491 510.76