Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00596 ATGGCAATGGCATCAGCGCCACCCCCTTCCCCTTTCCTCTTCCTTCTCACCGCCATCTTCATGTTCTTTCACCTCTCCCTCCTCGCTCACTCCGTCAACCCCGACTTCCACCCTCTAATGTCCTTCAAAGCCGCTTCCGACCCTTCCAACAGACTCGCCCACTGGAACTCCACAACCTCAGACCCCTGCACCTGGTACGGTGTCTCTTGTCTCCGTAACCGTGTCTCTCGCCTCGTCCTCCAAGACCTAAACCTCACAGGCTCCATCCTCCCCCTAACCTCTCTCACCCAGCTTCGCATCCTCAGCCTAAAACGCAACCGTTTCAACGGCCCCATAACCTCTCTGGCCAACCTCACCGCGCTCCGCCTTCTCTTCCTCTCCCACAACAACTTCTCCGGCCCCTTCCCCGCCACGCTCACCTCTCTCTACCGCCTTGATCTCTCACACAACACTCTCTCCGGCGAAATCCCCGCCACGCTCAACCGCTGGACCCACCTCCTCACCCTCCGCCTCGACTCCAACCGTCTCCGCGGCCGCATTCCCAGCAACATCAACCTCTCTCGTCTCCAAGACTTTAACGTCTCAAACAACCTCCTAACGGGTCAAATACCCGAATCGCTCTCGGGTTTCCCTGGATCCGCGTTTTCTCACAATCCCTCCCTCTGCGGAGCTCCTTTGCAAGAATGTAGAGCCAAAGGCAAAAGCAACGGCAAAAGCAAAGGCGAAGCAATCATCCCGGCGCTGGCTTCCCCGTTGAAGCCGCGAAACGACACTGTTTTTGCCAGACCCAGGGGGCGGGAGAAAATAATGGGAGTGTTGGTCTTGGTGGGTATTGTGGTGGGTGACGTGCTGGTGCTGGCTTTGGTGTCGCTGCTTCTCTACTGCTATTTCTGGAGGAACTATTCTGCTGCTGCACAATTGAGAAAAGGGGGAAAAGAGAGGAGTTGGAATACGGTGGATGAGTATAAGGGTGGTGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAAGAGCTGTTGCGTTCTTCGGCGGAGTTGTTGGGGAAGGGTGCGTTTGGGAGTGCCTATAAAGCGGTGCTTGACGACGGAACTGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGTGTTGGAGGGAAGAAGGAGTTCCACCAACGAATGGAACTTCTTGGAAGGTTGAGACACTCTAACGTTGTTAGTTTGAGGGCTTACTGTTTCACCAAAGACGACAAATTCCTCGTCTCTGATTACATGTGCAACGGTAGCTTCTCATTCCTTCTCCACGGTAATCGAGGACCAGGGCGGACCCCAGTGGACTGGACAACGAGGTTGAAGTTCGCAGCTGGAGCGGCACGAGGCGTGGCATTCATTCACAAACATAACCTCACCCATGGTAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAACGCGCGCGTCGCGGATTTTGGTCTCTCCATCTTCGCTGGCGCCTCTATTCTAAGATCCAACGGCTACCGTGCGCCAGAGGTATCGGACGGTCGCAAGCAGACCCAGATGTCTGACGTGTACTCCTTTGGCGTCCTATTGATAGAGATGGTGACCGGGAAGTGCCCCTCCACCGTGGGCGGCGGACACGAGACGGTGGTGGATCTTCCTAGGTGGGTCCGGTCGGTGGGGAGAGCGGAGTGGACGGCGGAGGTGTTCGATTTAGAACTGATGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTTCAGATAGCTATAGCGTGCACTGAGACCGAACCTCATCAACGGCTCAGGATGAGCCACGTGGTGAGAATGATTGAGGAATTGCGTGGGGTCCAGATGTCGCCGTGTGATGAAGGGTTGGAATCGCTGTCCGGGTCACTCTCCATGCCTGAAGCAAGTGCAAGTCAATGA 1917 0.5545 MAMASAPPPSPFLFLLTAIFMFFHLSLLAHSVNPDFHPLMSFKAASDPSNRLAHWNSTTSDPCTWYGVSCLRNRVSRLVLQDLNLTGSILPLTSLTQLRILSLKRNRFNGPITSLANLTALRLLFLSHNNFSGPFPATLTSLYRLDLSHNTLSGEIPATLNRWTHLLTLRLDSNRLRGRIPSNINLSRLQDFNVSNNLLTGQIPESLSGFPGSAFSHNPSLCGAPLQECRAKGKSNGKSKGEAIIPALASPLKPRNDTVFARPRGREKIMGVLVLVGIVVGDVLVLALVSLLLYCYFWRNYSAAAQLRKGGKERSWNTVDEYKGGGMVFLEGVRRFELEELLRSSAELLGKGAFGSAYKAVLDDGTVVAVKRLKEVSVGGKKEFHQRMELLGRLRHSNVVSLRAYCFTKDDKFLVSDYMCNGSFSFLLHGNRGPGRTPVDWTTRLKFAAGAARGVAFIHKHNLTHGNIKATNVLIDVAGNARVADFGLSIFAGASILRSNGYRAPEVSDGRKQTQMSDVYSFGVLLIEMVTGKCPSTVGGGHETVVDLPRWVRSVGRAEWTAEVFDLELMSYKDIEEEMVALLQIAIACTETEPHQRLRMSHVVRMIEELRGVQMSPCDEGLESLSGSLSMPEASASQ 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00596 638 Gene3D Ribonuclease Inhibitor 141 229 IPR032675 -
Viun2g00596 638 Gene3D Transferase(Phosphotransferase) domain 1 419 620 - -
Viun2g00596 638 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Viun2g00596 638 SUPERFAMILY Protein kinase-like (PK-like) 346 607 IPR011009 -
Viun2g00596 638 ProSiteProfiles Protein kinase domain profile. 343 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00596 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 612 IPR046959 -
Viun2g00596 638 SUPERFAMILY L domain-like 41 227 - -
Viun2g00596 638 Pfam Protein kinase domain 346 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00596 638 Gene3D Ribonuclease Inhibitor 38 140 IPR032675 -
Viun2g00596 638 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Viun2g00596 638 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00596 Viun-Chr2 14592679 14597992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00596 35 633 Receptor kinase-like Gene Family AT1G68400 58.464 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun2g00596 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00596 - - vun:114168386 1180.62