Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00594 ATGAGTAGCAATGGCGAAACTCGTAATGGTAGTCTCGACATTAGGGCTTTAATTTGCCACGCTGCTGCTGGTGCCTCTGCAGGAACAATAGCGGCTACATTTGTGTGCCCGTTGGATGTGATCAAGACTAGGCTACAAGTCCATGGCCTTCCTCAAGGGCAGAAAGGTAATGTCATTGTCACAAGCTTGCAAAATATAGTAAGAAATGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCGACGATACTGGCGTTACTTCCAAACTGGGCAGTTTACTTCACAAGTTATGAGCTATTAAAAGGCCTGCTTCGTTCACGCGCTGCTGCTGGTGCTGGTGCAGCAACGGCAATTTCTGTAAATCCATTATGGGTTGTTAAGACAAGACTTCAAACACAAGGAATGAGGCCCGATGTTGTTCCTTACAAGAGTGTTCTTTCTGCTCTGACAAGGATTACACACGAGGAAGGATTAAGAGGCTTATATAGTGGCATTATTCCTTCATTGGCTGGCATAAGTCATGTTGCAATTCAATTTCCAGCATTTGAAAGGATGAAGTCGTACATGGCAGAAAAAGATAACACAACTGTTGATAAGCTAAGTCCTGGAAGTGTTGCCATTGCATCATCAATTTCAAAAGTGTTTGCCTCTGTAATGACTTATCCACATGAGGTAATACGATCCCGGCTGCAAGAGCAAGGGCAGGCAAAAAGTAATGGGATCCAATATACAGGGGTTATTGACTGTACGAAGAAGTTGTTTCAAAAGGAAGGCATTGCTGGGTTTTATCGTGGTTGTGCAACAAATCTCTTAAGAACAACCCCATCTGCTGTAATTACATTCACTAGTTATGAGATGATACACAGATTTTTGCAGGGAGTTGTACCCCAGGATAAGGGGTATCCACAACATGGCTCTTCTAAATCCAATGAACTGAACAAACCTCAGTCAAAAGCCGAAGCCAGTGGCACTGATATGGGGCATCCACCGTCTCAGTCTAACATGAAAGCTTCGTCAATTCCTCTCGGAAACAAAGAGCACCTAACAAGACATTGA 1056 0.4394 MSSNGETRNGSLDIRALICHAAAGASAGTIAATFVCPLDVIKTRLQVHGLPQGQKGNVIVTSLQNIVRNEGFRGMYRGLSPTILALLPNWAVYFTSYELLKGLLRSRAAAGAGAATAISVNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGLRGLYSGIIPSLAGISHVAIQFPAFERMKSYMAEKDNTTVDKLSPGSVAIASSISKVFASVMTYPHEVIRSRLQEQGQAKSNGIQYTGVIDCTKKLFQKEGIAGFYRGCATNLLRTTPSAVITFTSYEMIHRFLQGVVPQDKGYPQHGSSKSNELNKPQSKAEASGTDMGHPPSQSNMKASSIPLGNKEHLTRH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00594 351 MobiDBLite consensus disorder prediction 302 340 - -
Viun2g00594 351 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Viun2g00594 351 PRINTS Mitochondrial carrier protein signature 209 231 IPR002067 GO:0055085
Viun2g00594 351 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Viun2g00594 351 PRINTS Mitochondrial carrier protein signature 115 133 IPR002067 GO:0055085
Viun2g00594 351 Gene3D Mitochondrial carrier domain 107 293 IPR023395 -
Viun2g00594 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Viun2g00594 351 SUPERFAMILY Mitochondrial carrier 18 286 IPR023395 -
Viun2g00594 351 Gene3D Mitochondrial carrier domain 4 106 IPR023395 -
Viun2g00594 351 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Viun2g00594 351 Pfam Mitochondrial carrier protein 200 292 IPR018108 -
Viun2g00594 351 Pfam Mitochondrial carrier protein 108 191 IPR018108 -
Viun2g00594 351 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 18 295 IPR044712 GO:0006862|GO:0055085
Viun2g00594 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 188 IPR018108 -
Viun2g00594 351 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 291 - -
Viun2g00594 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 200 290 IPR018108 -
Viun2g00594 351 MobiDBLite consensus disorder prediction 298 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00594 Viun-Chr2 14538660 14543847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00594 33 345 Chloroplast and Mitochondria Gene Families AT1G25380 61.027 7.12e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00594 K15115 - gmx:100797064 572.778