Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00591 ATGTTTGGCTCCATGTTGTCCTTCCATTTTCTACTCTCTTGTTTCATGCTTCTTGTCTTGGTTGCAGCTAATTGGGAACCCCAAGACGATTGTCCTTCTTCTCCTCAACCATGTGGCTATCTGGGGAAAATCTTCTTCCCCTTCACAACAAGCTCCAATCCAAAATGTGGGTTGCGAATAAGTGGCTGTGAAGACGACGGTGCAGTCAAACAAATCTCACTGGGAGGCAAAAAATTGTATAAAATTGATGCCATAATAAATCCTTTGGACCTCAATTACCTTTCAATTTTCATCCATTACCCTGATCTTGACACCGTTGCTACAGAGCAGCAGCGTATACAGCCTTCTGAGATAGAAAACGAGTATTTCACGATCGCTAACAATATTACCTTCTTCGGATGCTCTCTCAACCCCAACGAAATCACAAATTCAATCCCTTCAAACATGACTTTATACAGACATTGCCAAAACCACAGCATGTACTATAATTCTTCCCATTCGTTCGACTATCCCATGCCCAACATTCCATTCGCGTGCTTGCTTTTTCCGGTTTGTCCATGTGGAACCTTTTGCAATTGCCCTTCATTTACATTTCTATTTTCTATTCTCCAAATTAAATTAAAAATACCCAAAAATTGCAAACACTGTCATGGCCTCTGTAAGTTTAACTTTGAAGGACAACGCCTCAATTGTGATGGACAACCACCTCGTCTTTCCCAGCCCCCGGTTCCTCCACCTGCAACGGCTAAGGCTAAGAAAATAGCTTTATTTGTTGGAATACCAATCCTGGTTGTGGTTTTTGCCTTGGTTGTTGTTATTATTCTTTTGTTGTTGAAAGGAAGAAAGAAACGTTCAGGCCTCCAAAGCAAATCAAGAAGCGCTTATTCTTCTTCCTTCAGAAATACAACGTCCATGGAAAGTGGAGGTGTCTACTTTGGGATCTCTGTCTTCTCCTTCGACGAGCTCCGAGAGGCAACCAATAATTTTGTTGAAGACAGGAAGCTTGGAGAAGGAGGCTTTGGAATCGTTTACTTCGGAAAACTTAGAGATGGTCGTGAAGTTGCAGTGAAGCGGCTGTTCGAGCGCAACTACAGGCCAGTGGAGTCATTCATCAATGAAATCCAGATCCTCACACGTCTGCGACACAGAAACCTTGTGTCCCTCTATGGCTGCACTTCGCGTCACAGCCGGGACTTAATGCTAGTGTACGAGCACATCCCAAATGGCACTGTTAGCTCTCATCTCCACGGTGATCAAAGAAATTCAAGCTTTCTGCCATGGCATTTGAGAATGAAAATTGCCATACAAACTGCTAGTGCATTGGCTTATCTCCACGCTTCTGACATCATTCACCGGGATGTGAAAACCACCAACATTCTCCTGGACAATTCGTTTGATGCTAAGGTTACGGATTTTGGTCTTTCAAGGCTGTTCCCTGATGATGTCACCCACGTTTCCACTGCTCCAAGAGGGACCCCTGGTTATGTTGATCCGGATTATCGCCTATGCTACCAGCTGACAACAAAGAGTGATGTATATAGCTTTGGGGTTGTGCTTGTTGAGTTAATATCATCTCTCAAAGCAGTTGACATGGACAGGAACAGGGAAGACATTAAGTTGGCAAATCTTGCCATTAGGAAGATTCAAAAGGGTGCCTTTTATGAGTTGGTCGATCCTTCCCTTGGTTTCCACTCAGATGAGAAACTAAAAATGATGATAGGTTCGGTGGCAGAGTTGGCTTTTCGGTGTCTGCAAGAAGACAAGGAATTGAGACCCTCTATGGGTGAAGTATTGGAGGTGCTGGAGAGAATTCACAGTGGCAGGGATGAGCCACCGAATCAGGATGGAATTGTCGTTAATGGTGCTATAAGGGCTTCTCAAAGCTATGTTCATCCACCTCTTCCAAACACTCTGATAAACCCACAACAGCGCCTTTTCAAAACAAACTGA 1950 0.4385 MFGSMLSFHFLLSCFMLLVLVAANWEPQDDCPSSPQPCGYLGKIFFPFTTSSNPKCGLRISGCEDDGAVKQISLGGKKLYKIDAIINPLDLNYLSIFIHYPDLDTVATEQQRIQPSEIENEYFTIANNITFFGCSLNPNEITNSIPSNMTLYRHCQNHSMYYNSSHSFDYPMPNIPFACLLFPVCPCGTFCNCPSFTFLFSILQIKLKIPKNCKHCHGLCKFNFEGQRLNCDGQPPRLSQPPVPPPATAKAKKIALFVGIPILVVVFALVVVIILLLLKGRKKRSGLQSKSRSAYSSSFRNTTSMESGGVYFGISVFSFDELREATNNFVEDRKLGEGGFGIVYFGKLRDGREVAVKRLFERNYRPVESFINEIQILTRLRHRNLVSLYGCTSRHSRDLMLVYEHIPNGTVSSHLHGDQRNSSFLPWHLRMKIAIQTASALAYLHASDIIHRDVKTTNILLDNSFDAKVTDFGLSRLFPDDVTHVSTAPRGTPGYVDPDYRLCYQLTTKSDVYSFGVVLVELISSLKAVDMDRNREDIKLANLAIRKIQKGAFYELVDPSLGFHSDEKLKMMIGSVAELAFRCLQEDKELRPSMGEVLEVLERIHSGRDEPPNQDGIVVNGAIRASQSYVHPPLPNTLINPQQRLFKTN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00591 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Viun2g00591 649 FunFam Wall-associated receptor kinase-like 20 406 613 - -
Viun2g00591 649 Gene3D Phosphorylase Kinase; domain 1 301 405 - -
Viun2g00591 649 Gene3D Transferase(Phosphotransferase) domain 1 406 610 - -
Viun2g00591 649 SMART serkin_6 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00591 649 SUPERFAMILY Protein kinase-like (PK-like) 311 614 IPR011009 -
Viun2g00591 649 ProSiteProfiles Protein kinase domain profile. 329 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g00591 649 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Viun2g00591 649 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 617 IPR044652 GO:0004672
Viun2g00591 649 CDD STKc_IRAK 335 604 - -
Viun2g00591 649 Pfam Protein kinase domain 330 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00591 Viun-Chr2 14515358 14517936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00591 201 615 Receptor kinase-like Gene Family AT1G25390 51.422 7.37e-138 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun2g00591 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00591 - - var:108334729 1000.35