Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00566 ATGAAGCGCGGCAGAAAAAGTAAAAAGGAAAAGGAAGACATAAGAAAGAAGAAAATGTTGGATGCTGCTGACGATGACGGTGGGGTTTCTGTGCAGAGACCAAGTAGGAAAAGAAAGAAGGACGATGAAAATGATGAGCTTGAAATGTCTGGCGCTGAGAAACCGTATGGTCTTAGGGGTCGTAAACAAGAGATGATGTCGAAAGTCATCAAGAAAAGGGCTAAGTATTGTGAAAAGGGGCACTTAACATGCCACCAATGTAAGAGAAACGATAAAGGTCGTGTTGTGAGGTGCTCGACCTGTACCAAGAAAAAACTTTGCCTATTCTGTATACGAGCTTGGTATCCTCATTTGAAAGAGGAGGATATTGCTAAGGCATGTCCTGTGTGCCGTGGTAATTGCAATTGCAAAGCATGCCTGAGCTCTGTTCAACTTATTAATCAAATGAAGAAAAATCCTACAAGAGATAAGGGCGAGAAGGTCGAACACTCTTTGTATTTGCTGCAAGTACTTCTTCCGTTTCTAAGGCAGCTGGATGAAGAACAGATGATTGAGAAAGAGATAGAAGCTAAGATTCAAGGGCTCTCAGTCTCCGAGCTAAATATAGTTAAGGCAGATTTCTCTTTACAAGAGCGTGTGTACTGTGACAACTGCAAAACTTCAATATTCGATTACCACAGAAGCTGCACAAAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTAGTGGGCAGCTTGTAGGTGGAGCAGATCCAATTGTGTTGGACTTTATTTGGAAAGGACGTGGTTACTTGCATGGTGGTAAAGAAATTGAAACGGAAAACCAAAATGCATCAAATGCTGGTGCTAAGGCTGAGGTTCACGAATGGTCAAGATCCGGGTGGCATTCCCAAAGTAATGGTAGTATTCCTTGTCCAAAAGTCAACAATGAATGCAACCATGGTTTTCTTGAACTGAGAAGTATATTGGGTCAACATTTTATCTCTGAGTTAGTTTGTAAAGGGAAAGAACTTGTGCAGGCATACAAGATTCAGAATGTATTTAAGCCCCCTGACAGCTTCTGTTCATGTTTAGGTTTGGATAGAAACACAGATGTTAAGAATAGTAATATGAGGAAGGCTGCTTCTCGTGATAATATGGCTGACAACTATTTATACTGTCCTAAGGCTGTAGATCTACAGGACAAGGATTTAAATCATTTTCAGTGGCACTGGGAAAAGGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAGTGCACTTCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGAGCATTACGTCATGTAGCTAGTGCTACCAAACGCGGTCAACATTTGGACGTGGAAACAATTGATTGCTTAGACTGGTGTGAGGGGGGAATTAATATCCACCAATTCTTTACTGGGTATACAGAAGGTAGAATGGATTGGCTTGGCTGGCCTCAAATTTTGAAATTAAAGGATTGGCCACCTTCTAATTTATTTGAGGAACAGTTGCCTCGTCATTGTGCTGAGTTCATATCATCCTTACCCTTCAAGGAATATACTGATCCTCTCAGAGGTGCTCTTAACCTTGCTGTGATGTTGCCTGATGGTTGTCTAAAGCCAGACATGGGGCCAAAGTCTTATATTGCTTATGGATTTCCTTCGGAGCTTGGGCGTGGTGATTCTGTTACTAAGATCCATTGTGACATGTCAGATGCAGTAAATGTTTTGACCCACATTGCTGAAGTGAAATTGAATTCTGAGCAACTTACTGCCATTGAGAAGTTGAAAGAAAACCATTTTGAGCAAGACAAAAGAGAGTTATGTGGTAATGATCATGATGAAGAAACTAATACTTACATGCTTAATAATTCATCTTCTACCATAAATGCTTTGGACAACCAGAATAGTGTTCAAGTCATGGAGCATGAAGGTGGATTATGTGATCAGAAAGCAGTCAATCAGTTTCATCAATCTGGTAATAATGAGATTGCCACTGCTAAGGAGGATGGTCTTTTATGTGAGTCAGAAGTCAAAGAGGTTGACAAAGTGGACACAAAACTAGAAAATGATTTGTTGTTTGGGGGGGATGCTTCTGAAGGTGCTCTCTGGGATATTTTTCGGAGGCAGGATGTATCTAAATTGCAAGAATATCTGAAGAAGCATTTCCGAGAGTTCAGGCATGTCCATTGCTGCCCCTTAAAGCAGGTTATTCACCCCATTCATGACCAGACTTTTTATCTGACTATGGAGCATAAGAAGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGTTAGGAGATGCTGTTTTTATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGTATCAAGGTTGCGCTGGATTTTGTGTCCCCTGAAAATGTTGGAGAGTGTTTTCGGTTGACAGAAGAATTTCGCACACTTCCAATAAATCACAAGTCCACAGAGGACAAATTGGAGGTAAAGAAAATGACAGTATTTGCAATTCATGATGTCGTTGAAAAGTTGGAGAAATCAAGGTTAGAGATTGCAGACATCTGA 2565 0.4125 MKRGRKSKKEKEDIRKKKMLDAADDDGGVSVQRPSRKRKKDDENDELEMSGAEKPYGLRGRKQEMMSKVIKKRAKYCEKGHLTCHQCKRNDKGRVVRCSTCTKKKLCLFCIRAWYPHLKEEDIAKACPVCRGNCNCKACLSSVQLINQMKKNPTRDKGEKVEHSLYLLQVLLPFLRQLDEEQMIEKEIEAKIQGLSVSELNIVKADFSLQERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLVGGADPIVLDFIWKGRGYLHGGKEIETENQNASNAGAKAEVHEWSRSGWHSQSNGSIPCPKVNNECNHGFLELRSILGQHFISELVCKGKELVQAYKIQNVFKPPDSFCSCLGLDRNTDVKNSNMRKAASRDNMADNYLYCPKAVDLQDKDLNHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRALRHVASATKRGQHLDVETIDCLDWCEGGINIHQFFTGYTEGRMDWLGWPQILKLKDWPPSNLFEEQLPRHCAEFISSLPFKEYTDPLRGALNLAVMLPDGCLKPDMGPKSYIAYGFPSELGRGDSVTKIHCDMSDAVNVLTHIAEVKLNSEQLTAIEKLKENHFEQDKRELCGNDHDEETNTYMLNNSSSTINALDNQNSVQVMEHEGGLCDQKAVNQFHQSGNNEIATAKEDGLLCESEVKEVDKVDTKLENDLLFGGDASEGALWDIFRRQDVSKLQEYLKKHFREFRHVHCCPLKQVIHPIHDQTFYLTMEHKKKLKEEYGIEPWTFIQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHKSTEDKLEVKKMTVFAIHDVVEKLEKSRLEIADI 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00566 854 MobiDBLite consensus disorder prediction 1 58 - -
Viun2g00566 854 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 10 848 IPR045109 GO:0032454|GO:0033169
Viun2g00566 854 Gene3D Cupin 383 823 - -
Viun2g00566 854 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 80 143 IPR018866 -
Viun2g00566 854 SUPERFAMILY Clavaminate synthase-like 400 832 - -
Viun2g00566 854 ProSiteProfiles JmjC domain profile. 518 814 IPR003347 -
Viun2g00566 854 ProSiteProfiles Zinc finger RING-type profile. 84 131 IPR001841 -
Viun2g00566 854 SMART cupin_9 503 814 IPR003347 -
Viun2g00566 854 MobiDBLite consensus disorder prediction 13 58 - -
Viun2g00566 854 Pfam JmjC domain, hydroxylase 701 797 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00566 Viun-Chr2 13831595 13848368 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Viun2g00566 JmjC 1.6e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00566 K15601 - gmx:100797799 1348.18