Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00437 ATGATGCCCCCTCAGCAAGAAAAGACTGTCACACCTGACATTCCGGCCATCCCTAACCGCCCGGAGAACAGCTCCGTCCACGCCGAACCACCTTCCTCCGCCGCCAATCACATTCACAACACCAATAATTCTCACCAACAACCACAACCACAACCAAATATTTCAGCACCCAGATTTTCTGTTCTTCGTCAATCCCTTCGCCCAATTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACTTTTGGAAGGGACAAGAATGGTTGCGTATCTTCTCCAAAACAAAAACACACAAGGACAGTGTTGAATGGTGTGACTGGTATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGTCCCTCAGGTAGTGGCAAGACCACTTTACTCACTGCCCTCGCCGGCCGGCTCACCGGAAAACTCTCCGGCGCCGTAACCTATAACAACCACCCTTTCTCAAGTTCCATGAGGCGCAACATAGGGTTTGTGTCCCAAGAAGATGTGTTGTACCCTCACCTCACTGTGATCGAGACTCTAACTTACGCTGCCATGTTGAAGCTTCCGAGAAGTTTGACAAGGGAAGAGAAAATGGAGCAAGCCGAGATGATCATCGGGGAACTAGGGTTGTCCCGGTGCCGAAACAACCTCGTTGGTGGCGGCGCAGCCGTTTTCCGGGGGATTTCCGGCGGGGAGCGAAAGCGGGTCAACATAGGACAAGAGATGTTGGTAAACCCGAGTTTGTTGTTGCTCGATGAGCCAACATCCGGGTTGGACTCCACCACCGCCCAGCGCATCGTGGCAATGCTTCATAGTCTTGCTCTAAGTGGTCGAACGGTGGTGACCACCATTCACCAACCTTCGAGCAGGTTGTTTTGGATGTTTGACAAGGTGGTGTTGTTGTCGGACGGGTACCCGATTTTCACCGGGCAAGCAGGTCGGGCCATGGATTATTTTGAGTCCGTCGGGTTTGTGCCCACTTTGAATTTCATCAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGTATAGTTGTTGATGTCAAAGAAGATGAACATTTAAATCATCATGAGGATCAAGCTTCAATCAAACAATTTCTAGTTTCATCGTATAAGAATAATGTATATCCTCTTCTAAAACAAGAGATTCAACAAAATCACAGAGAACTAGCATCCTTTTCCTCAAGAACATTTCGAAGTCCTGAGAACCAATGGACCACTAGCTGGTGGGAACAAGTCATGGTTCTGCTCAAGAGAGGTTTAAAAGAGAGGAGACATGAATCTTTCTCTCGCCTAAGAATTTTCCAAGTCTTGTCTGTCTCAATTCTTTCAGGACTTCTGTGGTGGCATTCTGATCCCTTACATATACAAGATCAGGTAGGTTTGCTATTCTTCTTCTCCATCTTCTGGGGTTTCTTCCCTCTTTTCAATGCCATCTTTGCTTTTCCTCTGGATCGACCTATATTGATAAAAGAAATATCGTCAGGAATGTATCATTTATCATCGTATTATGTTGCTAGGATAGTTGGGGACTTACCAATGGAGTTAGTTCTTCCTACTATCTTTGTGACAATATCTTATTGGATGGGAGGTTTGAAGCCTTCCTTAGTGACATTTGTGTTTACTCTCTTGATCATGCTTTTCAATGTGCTAGTTTCTCAAGGAATAGGCCTTGCACTTGGGGCCATTCTAATGGATGCCAAACAAGCCACAACCTTAGCCTCAGTGACTATGCTAGTGTTTCTTTTGGCTGGGGGTTACTACATTCAGCAGATTCCATTCTTTATATCTTGGTTGAAGTACATCTCTTTTAGTCACTACTGCTATAAGCTTCTTGTAGGAGTGCAATACTCAATAAATGAGGTTTATGAGTGTGGACCAGGGTTACATTGTAAGACTAGAGATTTTCCTGCCATAAAGTGTTTAGGGCTTGATAATTTGTGGAAAGATGTGGTTGTTTTAACTATAATGTTGATTGGATATAGAGTTGTGGCATATCTAGCTTTGAAGAAGGTGTTACATCATTGA 2022 0.451 MMPPQQEKTVTPDIPAIPNRPENSSVHAEPPSSAANHIHNTNNSHQQPQPQPNISAPRFSVLRQSLRPITLKFEDVSYSITFGRDKNGCVSSPKQKHTRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLTGKLSGAVTYNNHPFSSSMRRNIGFVSQEDVLYPHLTVIETLTYAAMLKLPRSLTREEKMEQAEMIIGELGLSRCRNNLVGGGAAVFRGISGGERKRVNIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVAMLHSLALSGRTVVTTIHQPSSRLFWMFDKVVLLSDGYPIFTGQAGRAMDYFESVGFVPTLNFINPADFLLDLANGIVVDVKEDEHLNHHEDQASIKQFLVSSYKNNVYPLLKQEIQQNHRELASFSSRTFRSPENQWTTSWWEQVMVLLKRGLKERRHESFSRLRIFQVLSVSILSGLLWWHSDPLHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPILIKEISSGMYHLSSYYVARIVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVFTLLIMLFNVLVSQGIGLALGAILMDAKQATTLASVTMLVFLLAGGYYIQQIPFFISWLKYISFSHYCYKLLVGVQYSINEVYECGPGLHCKTRDFPAIKCLGLDNLWKDVVVLTIMLIGYRVVAYLALKKVLHH 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00437 673 Pfam ABC-2 type transporter 409 615 IPR013525 GO:0016020|GO:0140359
Viun2g00437 673 Gene3D - 73 320 IPR027417 -
Viun2g00437 673 FunFam ABC transporter G family member 22 89 320 - -
Viun2g00437 673 MobiDBLite consensus disorder prediction 25 55 - -
Viun2g00437 673 Pfam ABC transporter 102 254 IPR003439 GO:0005524
Viun2g00437 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 320 IPR027417 -
Viun2g00437 673 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Viun2g00437 673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 326 IPR003439 GO:0005524
Viun2g00437 673 SMART AAA_5 111 304 IPR003593 GO:0016887
Viun2g00437 673 CDD ABCG_EPDR 68 308 - -
Viun2g00437 673 MobiDBLite consensus disorder prediction 1 55 - -
Viun2g00437 673 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 41 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00437 Viun-Chr2 8898216 8902879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00437 86 287 Calmodulin-binding Proteins AT2G36910 30.189 2.20e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00437 K05681 - gmx:100810165 1103.97