Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00428 ATGGTGGACTTGGGGAGGAGAAGAATGAGGGGTGAAAGGAGAAGGAAGTTGCGTTTTAGCAAAATCTATTCATTTGCATGCGGGAAACAATCTCTCAAGGAGGATCATTCGCAGATAGGAGGAATAGGGTATTCCAGGGTGGTGTTTTGCAATGAACCAGAGACCTTTGAGGCTGGGATAAGGAGTTACGCTGATAATTCTGTGAGCTCTACAAAGTATAACCTTGCTACTTTCTTGCCTAAGTCCCTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGGCCTTCACAAAACTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGATTATTATCATTGGAGCAACTATGATCAAAGAAGGTATTGAAGATTGGCGAAGGAAACAGCAGGATATGGAGGTGAACAATAGAAGAGTTAAAGTGCATACAGGGCAAGGAATTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGACGAATTCTTTCCTGCAGACCTCCTACTGCTTTCTTCCAGTTATGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACACGAGGACATTCAATTAGGTGATTTTAAAGCAACAATCAAATGTGAAGACCCAAATGCAAATTTATATTCATTTATTGGGAGCATGGAGTATGAAGAACAGCATTATCCTCTTTCTCCTCTGCAACTTCTTCTGAGGGACTCTAAACTTCGTAACACAGACTATATATTTGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTGATTCAGAATTCCACTGATGCCCCTTCAAAGAGAACAAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCATGTTTTGTATCGTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTAGAGATGACTTGGACAATGGAGTGATGAAAAGGTGGTACCTAAGACCAGATGACTCTACAATTTTCTTTGATCCTGAGAGAGCACCAGCTGCTGCTATATTTCATTGTTTCACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGATGCAGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACTTGCAACTCGATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTTGAGAAGGCAATGGATAGAAAGAATGGTTTTCCTTTGATTGACAATTCAAGGGACTCACCTGTCAGAAATGCTCCCATCAAAGGATTTAACTTTACCGATGAAAGGATAATGAATGGAAAATGGTTTAATGAGCCTAATGCAAATGTTATTAAGAAATTTTTTCTCTTATTGTCAATCTGCCATACAGCCCTACCTGAAGTTGATGAAGATACGGGAAATGTCTCATATGAAACTGAATCTCCAGATGAATCAGCGTTTGTGATTGCAGCAAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCAATCTATGAATCGGATCCAGTTTCTGGTGACAAAATTGAACGGACATATAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATTGTGAAAGATGAAGAAGGGAGAATTTTGTTACTATGTAAAGGTGCTGATAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTTGGAACATGTAAATGAGTATGCTGATGCAGGTCTAAGGACTTTGATTCTGGCATATCGTGAACTTGATGAAAACCAATATAAGGAGTTTAACAATAAATTTTCTCAAGCAAAAAATTCAGTTAGTGAAGATCGGGAAACACTGATTGAGGAAATATCAGATAAGATCGAAAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATAGGTTTTGCTTGTAGTTTACTTAGACAAGGAATGAAACAAATTATAATTCATTTGGAAACTCCAGAAATTCAAGCATTGGAGAAGGTTGGAGACAAGGTGTCTATCGTTAAGGCGTGTAGAGAAAATGTCCGCCATCAAATATCTGAAGCTGCTCAGCAGCTTACTGCCTCCAGAGGAACCTCTCAGCAAGCATTTGCTTTAATTATTGATGGAAAATCACTTACTTATGCTCTAGAGGATAATATGAAGAACATGTTTCTGGATCTTGCAATTCGTTGTGCATCTGTTATCTGCTGCCGTTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTAAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATCGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGCTATTTGGAAAGGTTACTTCTTGTACATGGACATTGGTGTTACCGAAGAATCTCATCAATGATATGCTACTTCTTCTACAAAAACATCACATTTGGGTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGGCAACCCGCATACAATGACTGGTTTTTGTCAGTCTATAATGTCTTCTTTTCGTCTCTTCCTGTGATTGCTCTTGGTGTATTTGACCAGGATGTGTCTGCTCGGTACTGTCTGAGGTTTCCTATATTATATCAAGAAGGCGTGCAAAATTTTCTCTTTAGCTGGCAGCGAATTTTCAGCTGGATGCTTAATGGCTTTGTTAGTGCCATAATAATTTTCTTTTTCTGCACAAAAGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACTGCTGGCAGGGACATACTCGGAGCAACAATGTACACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTACTATAAATTACTTCACCTTGATTCAACACATTTTCATCTGGGGTTCCATTGCTATCTGGTACCTTTTCCTACTGGCATATGGGGCAATGTCTCCCAGCATTTCTGGAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCAGCACCCTCCTTCTGGATTGTGACATTGGTTGTGGTGATCTCAACACTTATCCCTTACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCACGATATGGTACAATGGATAAGGCACGAGGGAAAGACAAATGATCCTGAATTCGTCGCTATGGTGCGGCAAAGATCACTGCGGCCAACAACTGTCGGTTCAACGGCTCGCTTGGTGGCTAAGGATAATGACTTCAGAGACAGTTCAACTAACCATAGATAG 3597 0.4026 MVDLGRRRMRGERRRKLRFSKIYSFACGKQSLKEDHSQIGGIGYSRVVFCNEPETFEAGIRSYADNSVSSTKYNLATFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVSAILPLIIIIGATMIKEGIEDWRRKQQDMEVNNRRVKVHTGQGIFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLKQGLEVTSSLHEDIQLGDFKATIKCEDPNANLYSFIGSMEYEEQHYPLSPLQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDAPSKRTKVEKKMDRVIYFMFCIVFLMAFVGSIFFGIATRDDLDNGVMKRWYLRPDDSTIFFDPERAPAAAIFHCFTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMDRKNGFPLIDNSRDSPVRNAPIKGFNFTDERIMNGKWFNEPNANVIKKFFLLLSICHTALPEVDEDTGNVSYETESPDESAFVIAAREIGFEFYKRTQTSLSIYESDPVSGDKIERTYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLAKDGREFEEKTLEHVNEYADAGLRTLILAYRELDENQYKEFNNKFSQAKNSVSEDRETLIEEISDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLETPEIQALEKVGDKVSIVKACRENVRHQISEAAQQLTASRGTSQQAFALIIDGKSLTYALEDNMKNMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSVYNVFFSSLPVIALGVFDQDVSARYCLRFPILYQEGVQNFLFSWQRIFSWMLNGFVSAIIIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVTINYFTLIQHIFIWGSIAIWYLFLLAYGAMSPSISGNAYKVFIETLAPAPSFWIVTLVVVISTLIPYFSYSAIQMRFFPMYHDMVQWIRHEGKTNDPEFVAMVRQRSLRPTTVGSTARLVAKDNDFRDSSTNHR 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00428 1198 FunFam Phospholipid-transporting ATPase 124 294 - -
Viun2g00428 1198 Pfam Phospholipid-translocating ATPase N-terminal 48 114 IPR032631 -
Viun2g00428 1198 FunFam Phospholipid-transporting ATPase 542 700 - -
Viun2g00428 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 701 IPR023299 GO:0000166
Viun2g00428 1198 Gene3D - 700 905 IPR023214 -
Viun2g00428 1198 NCBIfam phospholipid-translocating P-type ATPase 63 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun2g00428 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1143 IPR023298 -
Viun2g00428 1198 Pfam Cation transport ATPase (P-type) 533 626 - -
Viun2g00428 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 35 1154 - -
Viun2g00428 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Viun2g00428 1198 NCBIfam HAD-IC family P-type ATPase 836 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun2g00428 1198 SFLD p-type atpase 414 916 IPR044492 -
Viun2g00428 1198 Gene3D - 549 699 IPR023299 GO:0000166
Viun2g00428 1198 FunFam Phospholipid-transporting ATPase 700 905 - -
Viun2g00428 1198 SFLD Haloacid Dehalogenase 414 916 - -
Viun2g00428 1198 SUPERFAMILY HAD-like 420 909 IPR036412 -
Viun2g00428 1198 Gene3D - 124 294 - -
Viun2g00428 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Viun2g00428 1198 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Viun2g00428 1198 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Viun2g00428 1198 CDD P-type_ATPase_APLT_Dnf-like 65 1025 - -
Viun2g00428 1198 SUPERFAMILY Calcium ATPase, transduction domain A 151 291 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00428 Viun-Chr2 8486182 8494335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00428 17 1193 Primary Pumps ATPases AT1G68710 72.300 0.0 1863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00428 K01530 - gmx:100811892 2219.12