Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g00387 | ATGACCAAACCCAACACGTTCTTTCACAATCTCATCAAGCCCTTCAAATTCAGTTCCAGTAAAGAGGAACATAGCGAAGATGATATGCAGAACTTAGCTGCACAGGAGAATAAGGTCTTCTCTTACGAAACATTGGTCGCTGCTACAAACAAATTTAGCATTCTTAACAAACTTGGTGAAGGAGGATTTGGACCCGTCTTTAAGGGGAAATTGAGTGACGGGAGAGAGATTGCAGTGAAGAGGTTATCGCGTAGATCGAATCAAGGGAAGACCCAGTTCATCAACGAGGCCAAGTTGTTGGGTCGTGTGCAGCACCGAAATGTGGTGAATCTGATCGGTTACTGCGCTCATGCCTCCGAGAAGCTTCTTGTTTATGAGTATGTCCCTCACAAGAGCCTTGACAAGTTTCTCTTCAAAACGGGGAAGAAAGAAGAGCTAAACTGGAAATGTAGATTTGACATCATCAATGGGGTGGGAAGGGGTCTGCTTTATCTTCACGAAGACTCTCACAACTGCATAATCCATCGCGACATAAAGGCCAGTAACATCTTACTGGATGAAAAATGGGGGCCTAAGATAGCAGATTTTGGTCTCGCCAGACTCTTCCCCGAAGACCAAACCCACGTCAACACCCGTGTGGCTGGAACCAACGGGTATTTGGCTCCAGAATATTTAATGTATGGCCATTTATCTGTGAAGGCTGACGTATTTAGCTATGGAGTTTTGGTGTTGGAATTGGTCACTGGCCGGAGAAATTCCTCCTTTGATGCCAACTCGAGTGCGCAGAATCTCCTCGACTGGGCATACTGGCTATACAAGAAGGGGAGGGCCTTGGAAATGGTGGACCCTGCATTGGGGTCTTCAGTGATAACAGAACAAGTAGAAATGTGCATTAAACTGGGTCTGTTGTGCACCCAAGGTGATCCAAACCAGCGTCCAACCATGGGACGTGTGGTGGTGATGCTGTCAAAGAAATCGAACCACATGGAAGAACCGACAAGACCAGGAATGGCTGGTTCCAGATTCAGAAGAGTGCCTCACAGACCCTCTGCAACGTTTTCTTCTGGGCTTGATGATGACTCTCATTCGCACACCGGTGATTCAAGCACCTATGGCACTAATAATAATACCACTTCTGCAACATCATCAACAACACCAAGCTCCAGTGCTACTGCAGAAGTAGACCCCAGAGGGAAACGACCAATGCAAGGTTAG | 1215 | 0.4683 | MTKPNTFFHNLIKPFKFSSSKEEHSEDDMQNLAAQENKVFSYETLVAATNKFSILNKLGEGGFGPVFKGKLSDGREIAVKRLSRRSNQGKTQFINEAKLLGRVQHRNVVNLIGYCAHASEKLLVYEYVPHKSLDKFLFKTGKKEELNWKCRFDIINGVGRGLLYLHEDSHNCIIHRDIKASNILLDEKWGPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMYGHLSVKADVFSYGVLVLELVTGRRNSSFDANSSAQNLLDWAYWLYKKGRALEMVDPALGSSVITEQVEMCIKLGLLCTQGDPNQRPTMGRVVVMLSKKSNHMEEPTRPGMAGSRFRRVPHRPSATFSSGLDDDSHSHTGDSSTYGTNNNTTSATSSTTPSSSATAEVDPRGKRPMQG | 404 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g00387 | 404 | Pfam | Protein kinase domain | 53 | 318 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g00387 | 404 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 128 | 330 | - | - | |
Viun2g00387 | 404 | MobiDBLite | consensus disorder prediction | 324 | 404 | - | - | |
Viun2g00387 | 404 | SUPERFAMILY | Protein kinase-like (PK-like) | 37 | 336 | IPR011009 | - | |
Viun2g00387 | 404 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 337 | - | - | |
Viun2g00387 | 404 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 127 | - | - | |
Viun2g00387 | 404 | CDD | STKc_IRAK | 58 | 324 | - | - | |
Viun2g00387 | 404 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 16 | 127 | - | - | |
Viun2g00387 | 404 | SMART | serkin_6 | 52 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g00387 | 404 | ProSiteProfiles | Protein kinase domain profile. | 52 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g00387 | 404 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 173 | 185 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g00387 | 404 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 21 | 380 | - | - | |
Viun2g00387 | 404 | MobiDBLite | consensus disorder prediction | 366 | 392 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g00387 | Viun-Chr2 | 7674469 | 7679358 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g00387 | 40 | 340 | Receptor kinase-like Gene Family | AT4G11530 | 52.145 | 6.01e-111 | 338 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun2g00387 | Pkinase | 7.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g00387 | - | - | gmx:100811523 | 600.512 |