Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g00386 | ATGACCAAACCCAACACGTTCTTTCACAATCTCATCAAGCCCTTCAAATTCAGTTCCAGTAAAGGTAAAGAGGAACATAGCGAAGATGATATGCAGAACTTAGCTGCACAGGAGAATAAGGTCTTCTCTTACGAAACATTGGTCGCTGCTACAAACAAATTTAGCATTCTTAACAAACTTGGTGAAGGAGGATTTGGACCCGTCTTTAAGGGGAAATTGAGTGACGGGAGAGAGATTGCAGTGAAGAGGTTATCGCGTAGATCGAATCAAGGGAAGACCCAGTTCATCAACGAGGCCAAGTTGTTGGGTCGTGTGCAGCACCGAAATGTGGTGAATCTGATCGGTTACTGCGCTCATGCCTCCGAGAAGCTTCTTGTTTATGAGTATGTCCCTCACAAGAGCCTTGACAAGTTTCTCTTCAAAACGGGGAAGAAAGAAGAGCTAAACTGGAAATGTAGATTTGACATCATCAATGGGGTGGGAAGGGGTCTGCTTTATCTTCACGAAGACTCTCACAACTGCATAATCCATCGCGACATAAAGGCCAGTAACATCTTACTGGATGAAAAATGGGGGCCTAAGATAGCAGATTTTGGTCTCGCCAGACTCTTCCCCGAAGACCAAACCCACGTCAACACCCGTGTGGCTGGAACCAACGGGTATTTGGCTCCAGAATATTTAATGTATGGCCATTTATCTGTGAAGGCTGACGTATTTAGCTATGGAGTTTTGGTGTTGGAATTGGTCACTGGCCGGAGAAATTCCTCCTTTGATGCCAACTCGAGTGCGCAGAATCTCCTCGACTGGGCATACTGGCTATACAAGAAGGGGAGGGCCTTGGAAATGGTGGACCCTGCATTGGGGTCTTCAGTGATAACAGAACAAGTAGAAATGTGCATTAAACTGGGTCTGTTGTGCACCCAAGGTGATCCAAACCAGCGTCCAACCATGGGACGTGTGGTGGTGATGCTGTCAAAGAAATCGAACCACATGGAAGAACCGACAAGACCAGGAATGGCTGGTTCCAGATTCAGAAGAGTGCCTCACAGACCCTCTGCAACGTTTTCTTCTGGGCTTGATGATGACTCTCATTCGCACACCGGTGATTCAAGCACCTATGGCACTAATAATAATACCACTTCTGCAACATCATCAACAACACCAAGCTCCAGTGCTACTGCAGAAGTAGACCCCAGAGGGAAACGACCAATGCAAGGTTAG | 1221 | 0.4676 | MTKPNTFFHNLIKPFKFSSSKGKEEHSEDDMQNLAAQENKVFSYETLVAATNKFSILNKLGEGGFGPVFKGKLSDGREIAVKRLSRRSNQGKTQFINEAKLLGRVQHRNVVNLIGYCAHASEKLLVYEYVPHKSLDKFLFKTGKKEELNWKCRFDIINGVGRGLLYLHEDSHNCIIHRDIKASNILLDEKWGPKIADFGLARLFPEDQTHVNTRVAGTNGYLAPEYLMYGHLSVKADVFSYGVLVLELVTGRRNSSFDANSSAQNLLDWAYWLYKKGRALEMVDPALGSSVITEQVEMCIKLGLLCTQGDPNQRPTMGRVVVMLSKKSNHMEEPTRPGMAGSRFRRVPHRPSATFSSGLDDDSHSHTGDSSTYGTNNNTTSATSSTTPSSSATAEVDPRGKRPMQG | 406 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g00386 | 406 | ProSiteProfiles | Protein kinase domain profile. | 54 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g00386 | 406 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 338 | IPR011009 | - | |
Viun2g00386 | 406 | CDD | STKc_IRAK | 60 | 326 | - | - | |
Viun2g00386 | 406 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 23 | 382 | - | - | |
Viun2g00386 | 406 | MobiDBLite | consensus disorder prediction | 368 | 394 | - | - | |
Viun2g00386 | 406 | SMART | serkin_6 | 54 | 331 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g00386 | 406 | Pfam | Protein kinase domain | 55 | 320 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g00386 | 406 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 130 | 332 | - | - | |
Viun2g00386 | 406 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 175 | 187 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g00386 | 406 | Gene3D | Phosphorylase Kinase; domain 1 | 16 | 129 | - | - | |
Viun2g00386 | 406 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 16 | 129 | - | - | |
Viun2g00386 | 406 | Gene3D | Transferase(Phosphotransferase) domain 1 | 130 | 339 | - | - | |
Viun2g00386 | 406 | MobiDBLite | consensus disorder prediction | 326 | 406 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g00386 | Viun-Chr2 | 7674469 | 7679375 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g00386 | 19 | 342 | Receptor kinase-like Gene Family | AT4G11530 | 49.693 | 4.47e-111 | 338 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun2g00386 | Pkinase | 7.5e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g00386 | - | - | gmx:100811523 | 611.683 |