Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00379 ATGACACGTCATTCCCTCCTCCTTTCTCTGTTATTCTTTGCGTCCACACTCTCTCGTCTCGTCCTAACTGTCACCGCCGGTCACGCTTCCGGTTTCACTTCCGGGGATACCGACTTTATTCGCGAAAGCTGCAACGCAACGTTGTATCCTGACCTGTGCTTCTCCTCGCTCTCTCGCTACGCCGCCACTGTGCAACGTAGCCCCGGCAGCCTCGCGCGAGTGGCCGTCGCCGTGGCGCTTGCCAAGGCGCACGGCGCAGCGGCCTATCTCTCGCACCAGACCGCAGCGGTGGTCGATGAGGATTCCGGCGCAGGTGCCGGCGCCGCCGTGAACGACTGCTTCGCAAACCTGGAGGACGCGGTGGACGAGATCCGCGGCTCGCTGAAGCAGATGCGGCGACTGAGACCGAACGAGGACTCCGGTTCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGACGGGTTCGAGGGCGTAGAAGAAGGTCCCGTGAAGACGAGCGTATGTGATCGCGTAACAAGAGTGAAGAAGTTCACAAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAGTTATAA 618 0.6052 MTRHSLLLSLLFFASTLSRLVLTVTAGHASGFTSGDTDFIRESCNATLYPDLCFSSLSRYAATVQRSPGSLARVAVAVALAKAHGAAAYLSHQTAAVVDEDSGAGAGAAVNDCFANLEDAVDEIRGSLKQMRRLRPNEDSGSVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPVKTSVCDRVTRVKKFTSNALALVNGFANKL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00379 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 201 IPR035513 -
Viun2g00379 205 Coils Coil 114 134 - -
Viun2g00379 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 201 IPR035513 -
Viun2g00379 205 CDD PMEI-like_3 43 203 - -
Viun2g00379 205 Pfam Plant invertase/pectin methylesterase inhibitor 38 197 IPR006501 GO:0004857
Viun2g00379 205 SMART PMEI_2 35 197 IPR006501 GO:0004857
Viun2g00379 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 197 - -
Viun2g00379 205 NCBIfam pectinesterase inhibitor domain 11 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00379 Viun-Chr2 7590889 7591747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00379 5 197 Carbohydrate Esterase AT3G49220 30.151 3.47e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00379 - - gmx:100797734 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00379 2 7590889 7591747 Viun2g00379 2 7590889 7591747 ECH