Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00363 ATGGAGAGGGATTTTATGGGTCTGAACTCGAAGGAACCGTTCGTTGAAGTGAAGGAAGGGATGAATAATGATTGTGGGTGCAAAAACTCAGGTTTCACAAAAGGAGGAATGGTAAAATGGCCCTTTATGAACAAAGTACCTGTCCATCCTCATTTGATGTCCTTGAATACTCCTCAGAAATCTGTGAATCATGATGGACAAGGTGGTGGCATTCATTTTTCCCTGACACCTTATCCTGCACTACATGATGTGAATTATATGAACCGCCCTCATAATGTGAAGATGTTTCCATCCCTAAAGAGTCCTTTTGCAACTGTTGCTCAGAATATGAATGCTTCTGGTATGAAGCAACCACTACTAGGTGGAATACCTGTTACAGCACCCCATTCATGTGTGAAACCATGTGTATCTACTCCTAAACTTACCATCTTCTATGCTGGCACCGTGAATGTGTTTGATGATATCACTCCTGAGAAGGCTAAAGCAATCATGTTGATGGCTAGGAATGGCATATCAGTTGCTTCTAATGTGACAGTGCCTAATAATGTTGAGGCAGCCAGACATAGTAAACCCATACCACTCTCAAGTCCTTTATCTGTTTCTTCACATAGTGGTGCAAAATCAGGGAGTGTTTCAAGTAGCAGTGATGAATTTCTGACACCTAAAACTTTTGTTAACAAAGCAGACACTCCTAAAGCAGTCAACACAAACACCATGCTACCATCAGCTGTGCCACAAGCTCGCAAGGCATCACTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGTTGAGTGCAGCACCATATAACCTGAACAAGAAGTGTGAGAATATGTCAGAAGAGAGTGCAAGTGAGGGTGCTGATGCAGTATAA 873 0.4261 MERDFMGLNSKEPFVEVKEGMNNDCGCKNSGFTKGGMVKWPFMNKVPVHPHLMSLNTPQKSVNHDGQGGGIHFSLTPYPALHDVNYMNRPHNVKMFPSLKSPFATVAQNMNASGMKQPLLGGIPVTAPHSCVKPCVSTPKLTIFYAGTVNVFDDITPEKAKAIMLMARNGISVASNVTVPNNVEAARHSKPIPLSSPLSVSSHSGAKSGSVSSSSDEFLTPKTFVNKADTPKAVNTNTMLPSAVPQARKASLARFLEKRKERVLSAAPYNLNKKCENMSEESASEGADAV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00363 290 Pfam tify domain 138 167 IPR010399 -
Viun2g00363 290 MobiDBLite consensus disorder prediction 267 290 - -
Viun2g00363 290 Pfam Jas motif 245 269 IPR018467 -
Viun2g00363 290 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 105 280 IPR040390 -
Viun2g00363 290 MobiDBLite consensus disorder prediction 188 216 - -
Viun2g00363 290 ProSiteProfiles Tify domain profile. 134 169 IPR010399 -
Viun2g00363 290 SMART tify_2 134 169 IPR010399 -
Viun2g00363 290 MobiDBLite consensus disorder prediction 194 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00363 Viun-Chr2 7404631 7407507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00363 110 285 Tify Gene Family AT3G17860 39.151 4.98e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun2g00363 tify 6.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00363 K13464 - gmx:100799314 283.108