Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00361 ATGGAGAGGGATTTTATGGGTCTGAACTCGAAGGAACCGTTCGTTGAAGTGAAGGAAGGGATGAATAATGATTGTGGGTGCAAAAACTCAGGTTTCACAAAAGGAGGAATGGTAAAATGGCCCTTTATGAACAAAGTACCTGTCCATCCTCATTTGATGTCCTTGAATACTCCTCAGCAGATCAGATCAGATGACTCCACTGCGTTCAGATTGAAATCTGTGAATCATGATGGACAAGGTGGTGGCATTCATTTTTCCCTGACACCTTATCCTGCACTACATGATGTGAATTATATGAACCGCCCTCATAATGTGAAGATGTTTCCATCCCTAAAGAGTCCTTTTGCAACTGTTGCTCAGAATATGAATGCTTCTGGTATGAAGCAACCACTACTAGGTGGAATACCTGTTACAGCACCCCATTCATGTGTGAAACCATGTGTATCTACTCCTAAACTTACCATCTTCTATGCTGGCACCGTGAATGTGTTTGATGATATCACTCCTGAGAAGGCTAAAGCAATCATGTTGATGGCTAGGAATGGCATATCAGTTGCTTCTAATGTGACAGTGCCTAATAATGTTGAGGCAGCCAGACATAGTAAACCCATACCACTCTCAAGTCCTTTATCTGTTTCTTCACATAGTGGTGCAAAATCAGGGAGTGTTTCAAGTAGCAGTGATGAATTTCTGACACCTAAAACTTTTGTTAACAAAGCAGACACTCCTAAAGCAGTCAACACAAACACCATGCTACCATCAGCTGTGCCACAAGCTCGCAAGGCATCACTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGTTGAGTGCAGCACCATATAACCTGAACAAGAAGTGTGAGAATATGTCAGAAGAGAGTGCAAGTGAGGGTGCTGATGCAGTATAA 909 0.4279 MERDFMGLNSKEPFVEVKEGMNNDCGCKNSGFTKGGMVKWPFMNKVPVHPHLMSLNTPQQIRSDDSTAFRLKSVNHDGQGGGIHFSLTPYPALHDVNYMNRPHNVKMFPSLKSPFATVAQNMNASGMKQPLLGGIPVTAPHSCVKPCVSTPKLTIFYAGTVNVFDDITPEKAKAIMLMARNGISVASNVTVPNNVEAARHSKPIPLSSPLSVSSHSGAKSGSVSSSSDEFLTPKTFVNKADTPKAVNTNTMLPSAVPQARKASLARFLEKRKERVLSAAPYNLNKKCENMSEESASEGADAV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00361 302 MobiDBLite consensus disorder prediction 279 302 - -
Viun2g00361 302 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 117 291 IPR040390 -
Viun2g00361 302 MobiDBLite consensus disorder prediction 200 228 - -
Viun2g00361 302 Pfam Jas motif 257 281 IPR018467 -
Viun2g00361 302 SMART tify_2 146 181 IPR010399 -
Viun2g00361 302 MobiDBLite consensus disorder prediction 206 228 - -
Viun2g00361 302 ProSiteProfiles Tify domain profile. 146 181 IPR010399 -
Viun2g00361 302 Pfam tify domain 150 179 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00361 Viun-Chr2 7404622 7407507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00361 122 297 Tify Gene Family AT3G17860 39.151 5.53e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Viun2g00361 tify 7.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00361 K13464 - gmx:100799314 278.485