Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00303 ATGTTTCTTGCACTGTCTTCTATCGTAACTATCTTTCTTTTGGCTTGTAATGAAGTAGTGTCAGCACATATTGACTACAATATTGATAGTCATCATCATTACCATCATCATTATCATCGTCATCGTCATCATCATCATCATAACCATCATGATCATCACCGTCAAAAACAATTTCGTGATAAGTCAGCTTCTTATCAGAGGATAATTACGGTTGATCAATCTGGTAATGGAGACTTCTCCAAGATACAATCTGCCATTGATTCAGTCCCTTCCAACAACAAGCAGTGGATTTACATCAAAGTGAATGAAGGCACTTACAGGGAGAAGTTGAAGATCCCAGAAGACAAGCCTTATATAATCCTGAAAGGAATGGGAAGAGATAAGACTTTTGTTGAGTGGGGTGACCATGATTCAAGTGCACAGAGTCCTACATTCTTAACCATGGCTAACGACATTGTGGTTAAGACCATTAGCTTCAGGAATACTTTCAATGATCCAAAAAATGGGAACTCCATGAAACCTGCAGTAGCTGCAATGATAAGTGGAGATAGGTCATCTTTCTATGGTGTTGGCTTCTATGGTTTGCAAGACACTCTGTGGGATGATAAAGGAAGACACTACTTCAATTGTTGTGCCATAGAAGGTGCTATGGATTTCATCTTTGGTGCTGGTCAATCTTTATATGAGAGTTGTAGCATATCAGTTCGTGAAGCGTGTCCAGGTAAAGCAATTATCGGTTTCATCACAGCGCAGGGGAGAACAAATCCAGCCGATGAAAATGGTTTTGTTTTCAAGAACTGCAAAGTCTATGGAGTTGGTAAAACTTATTTAGGAAGACCATGGAGAGCTTATGCTAGAGTTCTTTTCTACAAAACACAAATGTCTTCCATCATCCAACCACTAGGTTGGCAGCCATGGAATTCCTCTGCCGATGTAGATGGAGTGGCATTCTCGGAGTACGATAATTTTGGTCCTGGTTCGGCATTGTCTGGGAGAGTGAGTTGGTTGAAGAAATTGGATGCATCAACTCTCATGAAAATGACAAGTACAGCATTCGTGGACCGTGAAGGTTGGCTCAAGACTCATCACATGTTATAA 1098 0.4053 MFLALSSIVTIFLLACNEVVSAHIDYNIDSHHHYHHHYHRHRHHHHHNHHDHHRQKQFRDKSASYQRIITVDQSGNGDFSKIQSAIDSVPSNNKQWIYIKVNEGTYREKLKIPEDKPYIILKGMGRDKTFVEWGDHDSSAQSPTFLTMANDIVVKTISFRNTFNDPKNGNSMKPAVAAMISGDRSSFYGVGFYGLQDTLWDDKGRHYFNCCAIEGAMDFIFGAGQSLYESCSISVREACPGKAIIGFITAQGRTNPADENGFVFKNCKVYGVGKTYLGRPWRAYARVLFYKTQMSSIIQPLGWQPWNSSADVDGVAFSEYDNFGPGSALSGRVSWLKKLDASTLMKMTSTAFVDREGWLKTHHML 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00303 365 MobiDBLite consensus disorder prediction 35 56 - -
Viun2g00303 365 FunFam Pectinesterase 63 363 - -
Viun2g00303 365 Pfam Pectinesterase 69 354 IPR000070 GO:0030599|GO:0042545
Viun2g00303 365 Gene3D - 62 365 IPR012334 -
Viun2g00303 365 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 60 360 - -
Viun2g00303 365 MobiDBLite consensus disorder prediction 35 59 - -
Viun2g00303 365 SUPERFAMILY Pectin lyase-like 65 361 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00303 Viun-Chr2 6098702 6101227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00303 62 308 Carbohydrate Esterase AT2G19150 43.548 4.55e-75 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00303 - - gmx:100812950 423.705