Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00245 ATGGCCAAAGAAGACCAGAAATTTGCCATAGGAATCGACCTTGGTACAACGTATTCGTGCGTTGCAGTGTGGCTGGAGCAACACAGCAGGGTGGAGATAATCCACAACCAGCAAGGCAATAAAACCACACCTTCTTTTGTTGCCTTCACAGACAAGCATAGATTTATTGGTGATGCTGCTAAGAATCAGACTGTCACCAATCCTGAAAACACTGTTTTTGATGCTAAGAGGTTAATCGGTAGGAAATTCAGTGATCCCATTATTCAAAAAGAGAAAATGTTATGGCCATTCAAGGTTGTTGCAGGTGTTAATGACAAGCCTATGATCGTGGTTAAATACAAGGGTCAGGAGAAGTCCCTGTGTGCTGAAGAAATCTCATCTATGGTTCTCATGCAGATGCGGGAGGTTGCTGAGGCGTATTTGGAAACACCTGTGAAGAATGTTGTTGTCACAGTGCCTGCTTATTTCAATGACTCTCAACGTAAAGCCACTAAAGATGCGGGTGCCATTGCTGGCCTCAATGTTATGAGGATAATCAACGAGCCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAAGACTAACTGTGTTGGGGAACGAAATGTTTTCATTTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAGGACAAAGTCTTCCAAGTTAAGGCTACCGCCGGAAACACTCATCTAGGAGGAGAGGATTTTGACAATGAAATGGTGAACTACTTTGTGAAGGAGTTCAATAGTAAGAACAAAGTAGATATTAGTGGAGACCCAAGAGCCCTGAGGAGGTTGAGAACTGCATGTGAGAAGGCAAAAAGGATACTGTCATATGATATCACCACGGACATTGAGTTAGATGCTTTATTTAAGGGCTTTGACTTCTGCTTCTCAATCAGTCGCGCAAAGTTTGAGGGAATTAATATGGAGCTCTTTGAACAATGTATGGAGACAGTTGAAAGATGTTTTACTTATGCTAAGATGGACAAGAGCATTGTAGATGATGTTGTGCTTGTTGGTGGTTCCTCTAGGATCCCAAAAGTGCAGGAACTATTGCGAGACTTTTTTGATGGAAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTATTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGCTGAATGAAGGCATGAAGAATGTTCCAAAGTTGGAGCTACTGGATGTTACATCTCTATCCCTTGGTGAAGTTACAAAATCAGATATCATGAGTGTGGTCATCCCCAGGAACACTACCATTCCTGTGAGCAAGACAAAAGAATTCGTGACAACAAGAGATAACCAATCTGAAGTCTTGATTGGAGTTTACGAGGGTGAGAGAGCCCGAGCCAGTGATAACAATTTGTTAGGTTCTTTTGTTCTTTCTGGAGTTCCTCCTGCTCCTCGTGGCCATCCTGTGTATGTATGCTTTGTCATAGATTCAAATGGTATGTTATCAGTTTCTGCTGAGGAAAAAACGACTGGAAACAAGAATGAGATTATCATAACCAACGACAAAGAAAGACTGTCTCCTGAAGAAATTATGAGAATGATTCAAGAAGCTGAGAAGTTTCAGGCTGAAGATAAGAAATTCCTTAGAAAGTCCAAAGCAATCAATTCTTTGGATATGTACGTTTACAAGATGAATAATGCTTTGGAAAAGAAAGATATCATTTCTAAACTTGGCTTACTGACAAGGGAGATGATTAACTTGGAAATTAAGATGGGTACAAAATTGCTGGATGGTAAAAATGAGCATGACGAAGCATATGTATATGAGGATTATCTGAAGGAGCTTGAGAGCTTCTATGAAAACACAATAGGCAAGATTGGTTAA 1857 0.4103 MAKEDQKFAIGIDLGTTYSCVAVWLEQHSRVEIIHNQQGNKTTPSFVAFTDKHRFIGDAAKNQTVTNPENTVFDAKRLIGRKFSDPIIQKEKMLWPFKVVAGVNDKPMIVVKYKGQEKSLCAEEISSMVLMQMREVAEAYLETPVKNVVVTVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKTNCVGERNVFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDFDNEMVNYFVKEFNSKNKVDISGDPRALRRLRTACEKAKRILSYDITTDIELDALFKGFDFCFSISRAKFEGINMELFEQCMETVERCFTYAKMDKSIVDDVVLVGGSSRIPKVQELLRDFFDGKDLCKSINPDEAIAYGAAVQAALLNEGMKNVPKLELLDVTSLSLGEVTKSDIMSVVIPRNTTIPVSKTKEFVTTRDNQSEVLIGVYEGERARASDNNLLGSFVLSGVPPAPRGHPVYVCFVIDSNGMLSVSAEEKTTGNKNEIIITNDKERLSPEEIMRMIQEAEKFQAEDKKFLRKSKAINSLDMYVYKMNNALEKKDIISKLGLLTREMINLEIKMGTKLLDGKNEHDEAYVYEDYLKELESFYENTIGKIG 618
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00245 618 Gene3D - 73 128 - -
Viun2g00245 618 FunFam Heat shock protein 70 10 201 - -
Viun2g00245 618 FunFam Heat shock 70 kDa 237 320 - -
Viun2g00245 618 PANTHER HEAT SHOCK PROTEIN 70KDA 9 563 IPR013126 GO:0005524|GO:0140662
Viun2g00245 618 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Viun2g00245 618 Gene3D - 194 368 - -
Viun2g00245 618 FunFam Heat shock 70 kDa protein 391 545 - -
Viun2g00245 618 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Viun2g00245 618 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Viun2g00245 618 Gene3D - 516 618 IPR029048 -
Viun2g00245 618 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Viun2g00245 618 FunFam Heat shock 70 kDa protein 73 128 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 339 355 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 211 221 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 148 168 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 371 391 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 397 416 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 8 21 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 477 493 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 38 50 - -
Viun2g00245 618 PRINTS 70kDa heat shock protein signature 60 68 - -
Viun2g00245 618 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 514 IPR029047 -
Viun2g00245 618 Gene3D - 10 384 - -
Viun2g00245 618 Pfam Hsp70 protein 9 612 IPR013126 GO:0005524|GO:0140662
Viun2g00245 618 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
Viun2g00245 618 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Viun2g00245 618 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun2g00245 Viun-Chr2 4796739 4799118 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00245 1 617 Calmodulin-binding Proteins AT3G12580 66.236 0.0 824