Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00209 ATGCAAATTGTTGGAGCAACAAATATGTCTGTTGATTGTAGTGATGCATTTAACACTACAGAGGTTTTTCCTTCTCGAGATGTAATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAATCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAATATAGAGGACCATACAAGAATGCGTTATCCCGAAAGGTAAATGGTACTAGAAAATGCGAGTGTCCCTTCAGGTTAAGAGGAAAAGCTTTGAAAAAGGCCGAAGGATGGATTGTTAAGGTAATGTGTGGTTGTCACAATCATGAATTAGAGGAAACATTAGTGGGTCATCCATATGCAGGTCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACATTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCTCGACAGGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTTCTGAAGTTATTGGAACGTGAGCAGTACGTGTACTGGTATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATGTTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCCTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGCGTTACTTCTACAGAGTTAACATTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCGAGCTGACAACTTCACTTGGGCACTACAAAAGTTAAGAGGCCTGATTGTTAAAGACGAAGACATACCTCAGACCAAATGCTTGTCAATAGTCCATCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTGTGAATTCTTCTAACGAGAGTGAATACATGCAACGTCTGGCATTATTTGAAAAAGTTTGCTCAGCTTTTCCTAATTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCGTACAAGGAAAAGTTTGTCGCTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCATTAGGGTTGAGGCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACTCGCAGAGATTAAGTGGTCGTTTGAGAAAAGCATAAATGTAGTTGATCATATGCATAATAATACTTCATTATACATCAATCTGCAAGGACTTGTATCAAGGAGTGCATTGAGTCATATTACTGACGAGTATGACCGAGTTAAGGCTGTTGGTACTGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTGCTAGGTACAGTACAATGTGTCATCCTATTCCCTTGGAGGCAATTCATGTTCATTGGAAGAAGTTAAACTTTGACCGAGGAATGAATGACAAGGAGTCTGAGTTATCGTTGCAACCTGAATTGGATGCTTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAGTTGTATGAACTAGCATTTCCTGATACAATTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCTCCAGGGTCAAAAAGAGACAGATCAATTCATTCTGATCTTTCACATCGGGAGCATGTTGACGCAATGCGTCCTGTGCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTGGTCCATGAGTCTAAACGAAGAAGGGTTCTGTCAATGATGGACCAATTTCCAATTCAGATCCATCCGTTTATTGAAGAAATTATTGATGTGAAAGCAGATTCAAATTGTGGTTATCGGGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACAGTGGCAAGATATGTACGCTAAACTCTTCGGTAGCAATGACCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACGTCTATTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATACAACGTGGTTCTAGTTGCTTTATCGTTGAAGGAGTCCATGACATTTTTCCCACTTAGAGGACGGCCACCACTATCTCAGTCAAGGCACCGCCTTATTGCCATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGGGTCTGCAATACCTCCCACTGCTTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCACAAAAAAAAATGATTATGTAA 2463 0.3963 MQIVGATNMSVDCSDAFNTTEVFPSRDVMLNWARDVAKENGFVLIILRSETSTKSTRTTRRNQRKTFVILGCDRSGKYRGPYKNALSRKVNGTRKCECPFRLRGKALKKAEGWIVKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLEREQYVYWYRKVDDSNVIRDMFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESERADNFTWALQKLRGLIVKDEDIPQTKCLSIVHPKEKQDLVMDAWDVVVNSSNESEYMQRLALFEKVCSAFPNFGEYVKNMWLIPYKEKFVASWTNQVMHLGNTTTIRVEATNCKLKNLLQDSKEDMCSYWDAMNDMITLQLAEIKWSFEKSINVVDHMHNNTSLYINLQGLVSRSALSHITDEYDRVKAVGTDSSKCCCIVRTTHGLPCACELARYSTMCHPIPLEAIHVHWKKLNFDRGMNDKESELSLQPELDALLKRFQELDCAGKIILKAKLYELAFPDTISKCPTPTVVRIKGAPGSKRDRSIHSDLSHREHVDAMRPVHSGTSSCPSSHQLVHESKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDMYAKLFGSNDRVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVALSLKESMTFFPLRGRPPLSQSRHRLIAIGLVHDCHFVQVALKAGSAIPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPQKKMIM 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00209 820 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 67 188 IPR010061 GO:0004491
Viun2g00209 820 ProSiteProfiles OTU domain profile. 640 775 IPR003323 -
Viun2g00209 820 Pfam MULE transposase domain 239 293 IPR018289 -
Viun2g00209 820 CDD OTU 641 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00209 Viun-Chr2 4129926 4136569 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g00209 MULE 6.4e-10 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00209 - - gmx:100805365 1293.1