Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00208 ATGCAAATTGTTGGAGCAACAAATATGTCTGTTGATTGTAGTGATGCATTTAACACTACAGAGGTTTTTCCTTCTCGAGATGTAATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAATCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAATATAGAGGACCATACAAGAATGCGTTATCCCGAAAGGTAAATGGTACTAGAAAATGCGAGTGTCCCTTCAGGTTAAGAGGAAAAGCTTTGAAAAAGGCCGAAGGATGGATTGTTAAGGTAATGTGTGGTTGTCACAATCATGAATTAGAGGAAACATTAGTGGGTCATCCATATGCAGGTCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACATTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCTCGACAGGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTTCTGAAGTTATTGGAACGTGAGCAGTACGTGTACTGGTATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATGTTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCCTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGCGTTACTTCTACAGAGTTAACATTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCGAGCTGACAACTTCACTTGGGCACTACAAAAGTTAAGAGGCCTGATTGTTAAAGACGAAGACATACCTCAGGTGATTGTGACTAACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGGTTTCATATCAACAACAACGTGAAGACCAAATGCTTGTCAATAGTCCATCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTGTGAATTCTTCTAACGAGAGTGAATACATGCAACGTCTGGCATTATTTGAAAAAGTTTGCTCAGCTTTTCCTAATTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCGTACAAGGAAAAGTTTGTCGCTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCATTAGGGTTGAGGCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACTCGCAGAGATTAAGTGGTCGTTTGAGAAAAGCATAAATGTAGTTGATCATATGCATAATAATACTTCATTATACATCAATCTGCAAGGACTTGTATCAAGGAGTGCATTGAGTCATATTACTGACGAGTATGACCGAGTTAAGGCTGTTGGTACTGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTGCTAGGTACAGTACAATGTGTCATCCTATTCCCTTGGAGGCAATTCATGTTCATTGGAAGAAGTTAAACTTTGACCGAGGAATGAATGACAAGGAGTCTGAGTTATCGTTGCAACCTGAATTGGATGCTTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAGTTGTATGAACTAGCATTTCCTGATACAATTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCTCCAGGGTCAAAAAGAGACAGATCAATTCATTCTGATCTTTCACATCGGGAGCATGTTGACGCAATGCGTCCTGTGCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTGGTCCATGAGTCTAAACGAAGAAGGGTTCTGTCAATGATGGACCAATTTCCAATTCAGATCCATCCGTTTATTGAAGAAATTATTGATGTGAAAGCAGATTCAAATTGTGGTTATCGGGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACAGTGGCAAGATATGTACGCTAAACTCTTCGGTAGCAATGACCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACGTCTATTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATACAACGTGGTTCTAGTTGCTTTATCGTTGAAGGAGTCCATGACATTTTTCCCACTTAGAGGACGGCCACCACTATCTCAGTCAAGGCACCGCCTTATTGCCATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGGGTCTGCAATACCTCCCACTGCTTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCACAAAAAAAAATGATTATGTAA 2568 0.3956 MQIVGATNMSVDCSDAFNTTEVFPSRDVMLNWARDVAKENGFVLIILRSETSTKSTRTTRRNQRKTFVILGCDRSGKYRGPYKNALSRKVNGTRKCECPFRLRGKALKKAEGWIVKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLEREQYVYWYRKVDDSNVIRDMFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESERADNFTWALQKLRGLIVKDEDIPQVIVTNRDISLMNAVQVVFPSSSNLLCRFHINNNVKTKCLSIVHPKEKQDLVMDAWDVVVNSSNESEYMQRLALFEKVCSAFPNFGEYVKNMWLIPYKEKFVASWTNQVMHLGNTTTIRVEATNCKLKNLLQDSKEDMCSYWDAMNDMITLQLAEIKWSFEKSINVVDHMHNNTSLYINLQGLVSRSALSHITDEYDRVKAVGTDSSKCCCIVRTTHGLPCACELARYSTMCHPIPLEAIHVHWKKLNFDRGMNDKESELSLQPELDALLKRFQELDCAGKIILKAKLYELAFPDTISKCPTPTVVRIKGAPGSKRDRSIHSDLSHREHVDAMRPVHSGTSSCPSSHQLVHESKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDMYAKLFGSNDRVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVALSLKESMTFFPLRGRPPLSQSRHRLIAIGLVHDCHFVQVALKAGSAIPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPQKKMIM 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00208 855 ProSiteProfiles OTU domain profile. 675 810 IPR003323 -
Viun2g00208 855 Pfam MULE transposase domain 239 335 IPR018289 -
Viun2g00208 855 CDD OTU 676 804 - -
Viun2g00208 855 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 22 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00208 Viun-Chr2 4129926 4136569 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g00208 MULE 1.6e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00208 - - gmx:100805365 1367.06