Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00207 ATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAATCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTGTAATTTTGGGTTGCGATAGAAGTGGAAAATATAGAGGACCATACAAGAATGCGTTATCCCGAAAGGTAAATGGTACTAGAAAATGCGAGTGTCCCTTCAGGTTAAGAGGAAAAGCTTTGAAAAAGGCCGAAGGATGGATTGTTAAGGTAATGTGTGGTTGTCACAATCATGAATTAGAGGAAACATTAGTGGGTCATCCATATGCAGGTCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACATTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCTCGACAGGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTTCTGAAGTTATTGGAACGTGAGCAGTACGTGTACTGGTATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATGTTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCCTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGCGTTACTTCTACAGAGTTAACATTCTCTGTGGCTTTTGCTTTTGTGGAGTCTGAGCGAGCTGACAACTTCACTTGGGCACTACAAAAGTTAAGAGGCCTGATTGTTAAAGACGAAGACATACCTCAGGTGATTGTGACTAACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGGTTTCATATCAACAACAACGTGAAGACCAAATGCTTGTCAATAGTCCATCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTGTGAATTCTTCTAACGAGAGTGAATACATGCAACGTCTGGCATTATTTGAAAAAGTTTGCTCAGCTTTTCCTAATTTTGGTGAATATGTGAAAAATATGTGGCTGATTCCGTACAAGGAAAAGTTTGTCGCTTCATGGACAAATCAGGTGATGCATTTGGGTAACACAACAACCATTAGGGTTGAGGCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGGAAGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACTCGCAGAGATTAAGTGGTCGTTTGAGAAAAGCATAAATGTAGTTGATCATATGCATAATAATACTTCATTATACATCAATCTGCAAGGACTTGTATCAAGGAGTGCATTGAGTCATATTACTGACGAGTATGACCGAGTTAAGGCTGTTGGTACTGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTGCTAGGTACAGTACAATGTGTCATCCTATTCCCTTGGAGGCAATTCATGTTCATTGGAAGAAGTTAAACTTTGACCGAGGAATGAATGACAAGGAGTCTGAGTTATCGTTGCAACCTGAATTGGATGCTTTGCTCAAGAGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAGTTGTATGAACTAGCATTTCCTGATACAATTTCAAAGTGTCCAACTCCCACAGTGGTAAGAATAAAGGGTGCTCCAGGGTCAAAAAGAGACAGATCAATTCATTCTGATCTTTCACATCGGGAGCATGTTGACGCAATGCGTCCTGTGCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTGGTCCATGAGTCTAAACGAAGAAGGGTTCTGTCAATGATGGACCAATTTCCAATTCAGATCCATCCGTTTATTGAAGAAATTATTGATGTGAAAGCAGATTCAAATTGTGGTTATCGGGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACAGTGGCAAGATATGTACGCTAAACTCTTCGGTAGCAATGACCGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACGTCTATTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATACAACGTGGTTCTAGTTGCTTTATCGTTGAAGGAGTCCATGACATTTTTCCCACTTAGAGGACGGCCACCACTATCTCAGTCAAGGCACCGCCTTATTGCCATTGGGTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGGGTCTGCAATACCTCCCACTGCTTTGCAGTGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCACAAAAAAAAATGATTATGTAA 2484 0.3969 MLNWARDVAKENGFVLIILRSETSTKSTRTTRRNQRKTFVILGCDRSGKYRGPYKNALSRKVNGTRKCECPFRLRGKALKKAEGWIVKVMCGCHNHELEETLVGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLEREQYVYWYRKVDDSNVIRDMFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESERADNFTWALQKLRGLIVKDEDIPQVIVTNRDISLMNAVQVVFPSSSNLLCRFHINNNVKTKCLSIVHPKEKQDLVMDAWDVVVNSSNESEYMQRLALFEKVCSAFPNFGEYVKNMWLIPYKEKFVASWTNQVMHLGNTTTIRVEATNCKLKNLLQDSKEDMCSYWDAMNDMITLQLAEIKWSFEKSINVVDHMHNNTSLYINLQGLVSRSALSHITDEYDRVKAVGTDSSKCCCIVRTTHGLPCACELARYSTMCHPIPLEAIHVHWKKLNFDRGMNDKESELSLQPELDALLKRFQELDCAGKIILKAKLYELAFPDTISKCPTPTVVRIKGAPGSKRDRSIHSDLSHREHVDAMRPVHSGTSSCPSSHQLVHESKRRRVLSMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDMYAKLFGSNDRVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVALSLKESMTFFPLRGRPPLSQSRHRLIAIGLVHDCHFVQVALKAGSAIPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPQKKMIM 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00207 827 Pfam MULE transposase domain 211 307 IPR018289 -
Viun2g00207 827 ProSiteProfiles OTU domain profile. 647 782 IPR003323 -
Viun2g00207 827 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 13 424 - -
Viun2g00207 827 CDD OTU 648 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00207 Viun-Chr2 4129925 4136569 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g00207 MULE 1.5e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00207 - - gmx:100805365 1327.77