Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00199 ATGTTTCCGAGAGAGAATCATAGTAACGGCTATGAGCAGGTGGGTGGCATGGGTCACACCCATTCCCACATCCACAGAGAGCGAGTCCGTCGCGGCGCTCGCAGGTCACGTGGGTCCTCTTCCTCTCACTCTCTTAGGGTTTTGGAGCAATCACAACCGCACCACCACCGACCTCCCTGCACCGATTTCGACCTGGCCTACTTCCATTCCTACGCTCACCTCGGTATCCACCAGGAGATGATCAAGGATCGCGTGCGTACTGAAACTTACAGGGAAGCAATCATGCAGCACCAGAGTTTCATTGCGGGCAAAGTTGTGGTTGATGTCGGATGTGGTACTGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAACGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGGCAAATGAGGTTGTGAAAGCCAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGACGAGTCGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCGGAATGGATGGGCTATATGCTTCTATATGAGAGTATGCTTGGAAGTGTTATTAATGCTAGAGATCGATGGCTCAAACCTGGAGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACGCATACGGACAGATACAACGACAGTGTTGACTTCTGGCGCAATGTTTATGGAATTAATATGTCTGCCATGGTACCATTAGCTAAACAATGTGCATTTGAAGAACCTTCAGTAGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACATGTGGTAAAGTACATCGATAGTTATTCTGTTACCATCAATGAGTTGGAATCTGTAACAACCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAATGGGAATGCAATAGCATCAACCAATTACAATTCAACAACTTCGTTTATTGACAATCATCAGATGAATGGTAGTCAGAGGAAAAAGCGAACAAATCCAAATGAAGCACTGGTCCTGTCCACTGCGCCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCCATAGAGCTGGAACAAGATCAACTAATTGAAGGTTTAGTGACCTTGTCGCAAAGCAGAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGCATGTGAAAGAGTCTGTTATGAGATGA 1248 0.4415 MFPRENHSNGYEQVGGMGHTHSHIHRERVRRGARRSRGSSSSHSLRVLEQSQPHHHRPPCTDFDLAYFHSYAHLGIHQEMIKDRVRTETYREAIMQHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSATLYMAPVTHTDRYNDSVDFWRNVYGINMSAMVPLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYSVTINELESVTTKFKFNSMMRAPLHGFAFWFDVEFNGNAIASTNYNSTTSFIDNHQMNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGLVTLSQSRENARFMNIHLEYTSGGRSHVKESVMR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00199 415 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 41 403 IPR025799 GO:0016274|GO:0018216
Viun2g00199 415 FunFam Protein arginine N-methyltransferase 6 208 413 - -
Viun2g00199 415 CDD AdoMet_MTases 106 205 - -
Viun2g00199 415 Gene3D Vaccinia Virus protein VP39 62 206 IPR029063 -
Viun2g00199 415 Gene3D - 208 414 - -
Viun2g00199 415 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 64 415 IPR025799 GO:0016274|GO:0018216
Viun2g00199 415 Pfam Ribosomal protein L11 methyltransferase (PrmA) 102 177 - -
Viun2g00199 415 MobiDBLite consensus disorder prediction 23 37 - -
Viun2g00199 415 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 405 IPR029063 -
Viun2g00199 415 MobiDBLite consensus disorder prediction 1 57 - -
Viun2g00199 415 FunFam Protein arginine N-methyltransferase 6 60 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00199 Viun-Chr2 3898381 3912709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00199 67 415 C2H2 Transcription Factor Family AT3G12270 36.538 7.79e-66 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00199 2 3898381 3912709 Viun2g00199 2 3898381 3912709 ECH