Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00162 ATGGAGTGCCTCTTCGGTTTTGCATCTTCTGTTGCAAGAGATTTAGTGTGTGGAGCATTAAATCAATTGCGTTATCCTTGCTGCTTTAACAATTTTGTCAAAAAGCTTGAACAAGAAAAGGATGATTTAATTGTAACGAGAGATAGTGTACAAAAATTTGTTACACATACGAAGAGACAAGCGAGAAAGACTAGTGAAGTTGTTGACAAGTGGCTACAAGATGCTATCAGTGACAATGTGGATCAGATGCTGGAAGAGGCAAGAACAAAAAAAGGGTGTTGCTTTGGACACTGTCCAAATTGGATTTGGCGATATCGTGTGGGAAAAAAGTTAGCAAATAAAACCGTGGACCTTGAAAAGTTCATTGAAGAAGGTAGAAAATATGTACCATTTGATCGCATTGCTACGCTTCCTTTAGGGACCCTCGACGTTCTTTCAGAAAAATGCATGAATTTTGAGAGTCGACAATCTGCATATAAGCAACTACTGGACGCAGTGAAAAGTAATGATGTTGCAATGATTGGATTGTACGGGATGGGGGGTTGTGGTAAAACCACATTAGCAATGGACATTAGGAAGTCAGTAGAAGCAGAGCATCTTTTTGACAAAGTTCTTTCTGTGCCTATTTCTAGAACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCATTGCAGTTTGTATTTCCAGAAAGTGAAGAAATGGAGAGAGCCCAACGATTGTGTTTGAGATTAACCCAAAAGGAAAAATTTCTTATTATTCTAGATGATGTATGGCAGAAACTTGACTTTGGTGCCATTGGGATTCCCTCCCCTGAACACCGTAGCAGCTGCAAGATTCTCATTATTACTAGATTAGAAGATGTTTGTATTTCAATGGATTGTCAAAGAAAGATTTTCCTTAGAGTTTTAACAGATGAAGAAGCATGGACTCTTTTCCAAAGTAAAGCATTTATATCAGAAAACACCCCTGATACCATAAAGCATCTGGGAAGATTAATTTCCAATGAGTGTAAGGGATTGCCAGTTGCCATTGCGGCTGTTGCTAGTAGTTTGAAGGAAAAAGCTGAGACGATATGGAGGGTTGCATTGACTAGATTGAGAAGTTCTAAGCCAATTAATATCCAAAAAGGTTTGGCTGATCCCTACGAGTGCTTGCAGTTGAGCTATGATAATTTGGATACTAAAGAAGCAAAATCACTTTTTTTGTTATGTTCTGTGTTCCCTGAAGACTCTGCAATTCAGGTTGAACATTTAGCAAGATGTGCAATGGGGTTAGGTTTAGTTGAAGAAGCTCAGTCATATGAAGAGGCAAGGAATGAAGTGCTTGCAGCTAAAATTAAGCTCATTAGTTGTTGTTTATTATTGGATGCAGATGATGAATGTGTCAAAATGCATGACCTACTTCGTGATGTGGCCCACTTGATTGCCAAGAATGAGAATAAGATTATCAGGTGTGAATTGGAAAAATATGTTACTGTGGAACAAAATTCAGTAAGATATCTATGGTGTGCGAAATTTCCAAATGATTTGGATTGTTCCAATCTCGAGTTCTTATGCTTATACACAAAATTGGAAGAATTGGATGGGATTTTCGAAAGAATGGGAATGCTCAAAGTTTTGATTCTTATCGATAAAGAGGAGGGAGAAATACCATTGTCAACTATGTTTTTGAAAACATTAACAAATCTCCGTTATCTATTGATTGACGGTTATGAATTGAATGACTTCTCATTTCTAAGCTATATGAAGAATCTTCAAAGTCTTTCGTTGCATCGTTGTTCATTGTCTTCACTTCCTGAATTACAAACCGATGCTGCAATTACACAACTAACAACCTTAAAATTGTTAGAGTTATATAAATGTGACATTAAAGTCAAGAATTTTGAAGTGATCAAGAGAATACCGCTTTTGGAAGAGTTGTACATTGTTGATATTAAAGGAGAATGGGATACTAAGAGTGAAGACACCGTTGAATTCTTTAACACATTTAGTGTCCCCCAAACACTACAAAGGTATGGAATTGTATTAGGATCCCATAATTTTGCTTTCTCTCATCACAGAACTTTAGTGTTTAACCATTTTGACATATCAAATGAGGTAATTAAGGGTTTGGCAAAAAAAGCAGAGAATCTATACGTAGCAAATATTCATGGAGGTGTAAAAAATATCATTCCTGATATATTTCAAATTGAAGGAGAATGTTTGGATGAGTTGAATAAGTTTGAGATACGCGACTCTAAAGAGATAGAGTGTTTGATTGACACTAATAATAATTCGAGTGAGGAGATAACTCTCTTATCCAAGTTGCATATGCTGATAATTGATAACATGGAAAATCTAAGAGTTATATGGCATTGTTTTCAACCTGTCAATGGGCCTTTTGGGAACTTAGAGAAGTTGTATTTAAGTGATTGTCCACAATTGACATCTCTCTTCACATATGTCGTTGCTCGAAGTTTGGTACAATTGAAAATATTAGTAATATCAAAATGTGATGGACTGAAGCATATATTAGCAGGTGATGACAAAATGGAGAAAATACAAGATGAATACTCCAATGAAAATCCTATACAAATCTTTCAAAGTTTGCAGAAAGTAAAGATAAATAGGTGTAAAGAATTAAAGCATATATTCTCGGCCAACATTGTTGGAGGATTAGGTCAATTAAAAGTTCTCAAGATAGAAAAATGCCACAAGCTAGATCAAATTATTGGGGATATTGTTCCATTGGAAGACCAAGATCAAAAAGAAGAAGTTGATGAAATCATCGAGGAAGGAACTATATCTAGCCTTGCAAGCCTTAAGAAAAATAAGGCAAATTTGAATGGTATCTTCCCAAACTTAAGAAAGCTCTCGGTGCGTGATTGTGGCCAACTGAAATATATGCTTGGCCAATATGACGTAGCTAATCAGGATTCTAAGGAGATTCATATTCAATTCTCAGCATTGGAAAGACTCTCTCTTCATAATCTACCAAACTTTGTTAGCATTTGTTCTACCAACACTCTCATTGTGACGTGTCCATCTTTGAAGGACTTTGACTGTTACAGATGTTTCTATCGTTTTTATGATTCTGATCCAAAATGGATTCAGAACCATCTCCCCACTTTACAAACTCTATCTGTAAGGTATTCTGAAGTGGAATGTATCTTTTGTCTTAATGGACACGGAATGATTGGGCAACAAGTGAATTTAAGGTTAAGCCATTTGAGTTTTGAAAATCTGCCTCAAATGACTTATATTTGGGTGGCTTTCAAGAATTCAGTTACTCTCCAACATCTCACCACACTAGAAATAACGAGATGTGCAAAATTGGAAGTAATATTTCCACCCTCTGTTTTAAGAAGCTTACCAGAGTTGAAGTTCCTAACCATAATAGAATGCATGGAATTGAAGCAGATCATAGAAGAAGATGAGGACGATGGAAAGTTGTCCAACCTTATTTCTACACAGCCATGCTTCCCAAAACTTGAAAGTTTGTATGTCGAGGAATGCCACAAGTTGAAATGTTTGTCCTCTTCATCCAATAATCTTCCTGACCTTAGGATTCTCACTATAATTGGAGCCTCTGAACTAAAAGAAATTATTGGATGTGAGCAAGGAGCTTCAGATAATTCTTCTACCTTCCCAAATCTTGGAAAAAAAATGTCTAATCTTCTTTCTACACAGCCATGCTTCCCAAAACTAGAAAGTTTGTATATTCAGGATTGCCACAAGTTGAAATGTTTGTCTTCTTCATCCAATGATCTTCGTAACCTGAGGTTTTTGACTATAAATGGAGCCTCTGAACTAGAAGAAATTATTATATGTGAGCAAGGAGCTTCAAGAAATTCTCTTACCTTCTCAAATCTTGGAACTTTGAAACTATCTGGATGTGCAAAATTGGAAGTAATCTTTCCAAAGTCTGTTTTAGGATGCTTACCAGAGTTAAAAAGCCTAATCATAACAGAATGCACGAACTTGAAGCAGATTGTTGGATGTGAACAAGGAGCCTCAAAGTATTCTTTTACCTTCCCGAGTCTTGAAAGATTAGAAATAATTGGATGTGCAAAATTGGAAGTAATCTTTTCTTGGTCTGTTTTAAGATGCTTACCTGAGTTGAATCTTTTGAAGATAATAAATTGCACAGAATTAAGACAAATCATTGAAGATGATGTGGAAGATAAAAAATTGTCTAATCTTCTTTCTCGTCAACCATGCTTCCCAAAACTAGAAGCGATGCATGTTGATCACTGTCAAAAACTCAAAAGATTTTTCCCTGGATCTACATCTAATTACCTTCCCAATCTTCATCTTTTGATTATAAATGGAGCCTCTGAACTAGAAGAACTTGTTGGATGTAAACAAGGAAAATGTGATGAGATTAGAAATACTGAAGTTGAACTTCCAAGACTCAAACTTTTAATATTTTTTCATCTTTCAAGCTTTTGTCAAGAGATTGAATTGCCCAATTTAAACAATAGCATTGTCTACGAATGTCCAAATTTCTCTTTCACTTCAACAACCACTATTGGGAAGCTCTGTCAAAATTTTCCTCATGAAGATTTCAAAAACACTGCACTTTATATGTGGGACATAGTGAGGGTCATAAGAAATTGTGATGAAGATTCTACTGTTGGTGGTAGCAATGAGTTCACTTCATCAGAGGAATCACACAGTGAAGGAGGCCTTGCGGACCAACATGCACTCGAAGAAACAACAGAGATTGGGGACATAGGAAATGGGAGCATTAAAGACGGACCTGCATCAGAGTGTGCTAAGACAAAATCTTCGTCAACCGGTGTTGAAGACATTAGCATTGGAGGTGGTGTTGCAACTCACATCGAGTCTAGTGAAGATTCCAAGCTTGTTGAACAAGATGACACAGCACAGACACAAATAGATGAGAATTCTAAGAGGTCTAGTAGTATGGACATGGTGCGACATTACGAGGTTGTTGAACAAACTGATGGGCCTAATGAAAAATGGGAAAGACCTTCTCTACATCTGAAGGTCGAACATGTTAACAGTACCTTCGGAGAAGGTTCTAACTTGGTCGATAAAGAAGGCGAAATAGGTGTGGTTTCTGGTGACTGTATTGTGCCTGCGAGAAACGAAGAACCAAAGAGGGAATTTGTTGCAAAAGTTTCCACTTCAGAAACATCAAGAATAGCACCACCATTAACAAACTCTCAACCAGTTGAAAGGCCAACTCCAAGTTGTTCGGATATTTCTTTACGTCATACACTCTCAAATAGTATTGAGCGTGTTGTTGTAGAGGAAACCACAGCAAAGAACACCAATATGACAACTTCATCAATTCATTTTAGCGAAATTAAAAGCAGCCAAACTGAGGCACTCAATGCAAAAGAAAGTGAAGAGCATCCTAATAAAATCATTCAAGACTTTGGGGCAAATGATATGATGAGTTTATTTGCACCCGTTGTTGTGGGGAAAGAAGGTGAAGATAACCTAGTTGGAAAGACCCTTGCTGAGCTAGAAAAGTATCTGAAGATGCCTCTGAAGGATATAGTTAGCTCTGAGACTAACGCCCTTCGCCTTTTGTCTGCTCTTAATTTCCTCTCCAACCTTCCTTTCAAAGATCAGACTGTATCAGATGGACTCCAACATATTATAGGCACTATGCACCAAGAGTTCCCTACCATTCTATGCTCATTTAAGCAATGCTTTGCCACCACTAACAAGTTGGCAGAACTTGAAGCTCGTGCGAACGAGGTGACCATTAAAAGGAATTTGTATGAAGAAGCTCAACGAAAGGAAGTAGTTTTGAAGGAACAAATCATTAGGTTGAAGGAAGAAATAAGAGTTTGTGAGGTTGCCTTATCATCCCTGGAGGAGGAAAAAAATAAATGCATTGCAGAAACTGTAGGATACAAAACAGAGCTTCAAAATGTGAGGAAATATGAATCTCAAATGTTGGAGGTGGCTTATAAATGGTCAGTTCTGTGTAGTCAATATCAGCTCAATCGCATGCCTGCCAGAAATCCCTCGTGA 6000 0.3713 MECLFGFASSVARDLVCGALNQLRYPCCFNNFVKKLEQEKDDLIVTRDSVQKFVTHTKRQARKTSEVVDKWLQDAISDNVDQMLEEARTKKGCCFGHCPNWIWRYRVGKKLANKTVDLEKFIEEGRKYVPFDRIATLPLGTLDVLSEKCMNFESRQSAYKQLLDAVKSNDVAMIGLYGMGGCGKTTLAMDIRKSVEAEHLFDKVLSVPISRTVEVRRIQEKIASSLQFVFPESEEMERAQRLCLRLTQKEKFLIILDDVWQKLDFGAIGIPSPEHRSSCKILIITRLEDVCISMDCQRKIFLRVLTDEEAWTLFQSKAFISENTPDTIKHLGRLISNECKGLPVAIAAVASSLKEKAETIWRVALTRLRSSKPINIQKGLADPYECLQLSYDNLDTKEAKSLFLLCSVFPEDSAIQVEHLARCAMGLGLVEEAQSYEEARNEVLAAKIKLISCCLLLDADDECVKMHDLLRDVAHLIAKNENKIIRCELEKYVTVEQNSVRYLWCAKFPNDLDCSNLEFLCLYTKLEELDGIFERMGMLKVLILIDKEEGEIPLSTMFLKTLTNLRYLLIDGYELNDFSFLSYMKNLQSLSLHRCSLSSLPELQTDAAITQLTTLKLLELYKCDIKVKNFEVIKRIPLLEELYIVDIKGEWDTKSEDTVEFFNTFSVPQTLQRYGIVLGSHNFAFSHHRTLVFNHFDISNEVIKGLAKKAENLYVANIHGGVKNIIPDIFQIEGECLDELNKFEIRDSKEIECLIDTNNNSSEEITLLSKLHMLIIDNMENLRVIWHCFQPVNGPFGNLEKLYLSDCPQLTSLFTYVVARSLVQLKILVISKCDGLKHILAGDDKMEKIQDEYSNENPIQIFQSLQKVKINRCKELKHIFSANIVGGLGQLKVLKIEKCHKLDQIIGDIVPLEDQDQKEEVDEIIEEGTISSLASLKKNKANLNGIFPNLRKLSVRDCGQLKYMLGQYDVANQDSKEIHIQFSALERLSLHNLPNFVSICSTNTLIVTCPSLKDFDCYRCFYRFYDSDPKWIQNHLPTLQTLSVRYSEVECIFCLNGHGMIGQQVNLRLSHLSFENLPQMTYIWVAFKNSVTLQHLTTLEITRCAKLEVIFPPSVLRSLPELKFLTIIECMELKQIIEEDEDDGKLSNLISTQPCFPKLESLYVEECHKLKCLSSSSNNLPDLRILTIIGASELKEIIGCEQGASDNSSTFPNLGKKMSNLLSTQPCFPKLESLYIQDCHKLKCLSSSSNDLRNLRFLTINGASELEEIIICEQGASRNSLTFSNLGTLKLSGCAKLEVIFPKSVLGCLPELKSLIITECTNLKQIVGCEQGASKYSFTFPSLERLEIIGCAKLEVIFSWSVLRCLPELNLLKIINCTELRQIIEDDVEDKKLSNLLSRQPCFPKLEAMHVDHCQKLKRFFPGSTSNYLPNLHLLIINGASELEELVGCKQGKCDEIRNTEVELPRLKLLIFFHLSSFCQEIELPNLNNSIVYECPNFSFTSTTTIGKLCQNFPHEDFKNTALYMWDIVRVIRNCDEDSTVGGSNEFTSSEESHSEGGLADQHALEETTEIGDIGNGSIKDGPASECAKTKSSSTGVEDISIGGGVATHIESSEDSKLVEQDDTAQTQIDENSKRSSSMDMVRHYEVVEQTDGPNEKWERPSLHLKVEHVNSTFGEGSNLVDKEGEIGVVSGDCIVPARNEEPKREFVAKVSTSETSRIAPPLTNSQPVERPTPSCSDISLRHTLSNSIERVVVEETTAKNTNMTTSSIHFSEIKSSQTEALNAKESEEHPNKIIQDFGANDMMSLFAPVVVGKEGEDNLVGKTLAELEKYLKMPLKDIVSSETNALRLLSALNFLSNLPFKDQTVSDGLQHIIGTMHQEFPTILCSFKQCFATTNKLAELEARANEVTIKRNLYEEAQRKEVVLKEQIIRLKEEIRVCEVALSSLEEEKNKCIAETVGYKTELQNVRKYESQMLEVAYKWSVLCSQYQLNRMPARNPS 1999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00162 1999 FunFam Probable disease resistance protein At1g61300 148 299 - -
Viun2g00162 1999 Gene3D - 390 476 IPR036388 -
Viun2g00162 1999 Gene3D - 143 301 IPR027417 -
Viun2g00162 1999 PRINTS Disease resistance protein signature 820 836 - -
Viun2g00162 1999 PRINTS Disease resistance protein signature 339 353 - -
Viun2g00162 1999 PRINTS Disease resistance protein signature 246 260 - -
Viun2g00162 1999 PRINTS Disease resistance protein signature 173 188 - -
Viun2g00162 1999 MobiDBLite consensus disorder prediction 1541 1555 - -
Viun2g00162 1999 Pfam NB-ARC domain 165 393 IPR002182 GO:0043531
Viun2g00162 1999 SUPERFAMILY L domain-like 462 1168 - -
Viun2g00162 1999 Gene3D Ribonuclease Inhibitor 683 1003 IPR032675 -
Viun2g00162 1999 Gene3D Ribonuclease Inhibitor 1273 1389 IPR032675 -
Viun2g00162 1999 Gene3D Ribonuclease Inhibitor 1009 1202 IPR032675 -
Viun2g00162 1999 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 936 1198 - -
Viun2g00162 1999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 406 IPR027417 -
Viun2g00162 1999 SUPERFAMILY RNI-like 985 1381 - -
Viun2g00162 1999 Gene3D Ribonuclease Inhibitor 481 673 IPR032675 -
Viun2g00162 1999 MobiDBLite consensus disorder prediction 1709 1736 - -
Viun2g00162 1999 Coils Coil 1898 1949 - -
Viun2g00162 1999 Gene3D - 304 389 IPR042197 -
Viun2g00162 1999 MobiDBLite consensus disorder prediction 1712 1736 - -
Viun2g00162 1999 MobiDBLite consensus disorder prediction 1541 1639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00162 Viun-Chr2 3499574 3515646 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00162 170 647 WRKY Transcription Factor Family AT5G45050 23.307 5.78e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00162 - - vun:114166266 3961.76