Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00152 ATGTCCAACTCTGACGGACCCACTAACGGCGTCACCACTAACGACGCAAACGCAGTCGTCGACTCCAACCAGAGAAGCGCCACCACCGCCGCCGCCACCACCACGCAGGCTGCGGCGCTGGCAGTTAAGAAACCTCCGTCCAAGGACCGTCACAGCAAAGTCGACGGCCGCGGACGGCGCATTCGCATGCCGATCATATGCGCGGCGCGCGTGTTCCAGCTCACGCGTGAGCTAGGTCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCACCGGCACCACACCGGCCACGTTCTCCACAGTCTCCGATCACAAACCGCTTCTCCCTCCCCCAACGCCTTTCATCCTCGGCAAGCGCATTCGCCCCGACGACACCGACGCCGTTTCAAAGGACGAGGCCGTTTCGCTCGTCGCGCCGCCCACACCGCCCGCGCTCTGGGCGCTCCCTCCGCGTCCTGACTTCAGCCAGGTCTGGAGCTTCGCCGCCGCGGCCGCAGCCGCGGCGCCGCCGGAACTCGTTTCGGTCTCGTCGCAGAATTCCTTGTTTCACCACCACCAACACCAGCACCATCACCAGCAACAACAGGCAGCCATGGGAGAAGCCTCCGCGGCGAGGCTCGGAAATTACCTCCCCGGTCACCTCAATTTGCTCGCCTCGTTGTCCGGCGGCCATGGAAATTCCGGCCGGCGAGACGAGGAGCCTCGTTGA 747 0.6546 MSNSDGPTNGVTTNDANAVVDSNQRSATTAAATTTQAAALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSTVSDHKPLLPPPTPFILGKRIRPDDTDAVSKDEAVSLVAPPTPPALWALPPRPDFSQVWSFAAAAAAAAPPELVSVSSQNSLFHHHQHQHHHQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDEEPR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00152 248 MobiDBLite consensus disorder prediction 194 214 - -
Viun2g00152 248 Pfam TCP family transcription factor 47 117 IPR017887 -
Viun2g00152 248 ProSiteProfiles TCP domain profile. 47 101 IPR017887 -
Viun2g00152 248 MobiDBLite consensus disorder prediction 1 55 - -
Viun2g00152 248 MobiDBLite consensus disorder prediction 1 36 - -
Viun2g00152 248 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 203 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00152 Viun-Chr2 3365197 3366726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00152 28 248 TCP Transcription Factor Family AT5G23280 61.224 1.91e-87 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun2g00152 TCP 1.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00152 K16221 - gmx:100786264 365.155