Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00135 ATGTGGAAGCCCGTTTTGGTGATGATTATTGTTAACCTAGCTTTGGCTTTTGTCAATATATTTCTTAAGAAAGTGCTTAATGAAGGAGTGGATTACTTCACCATCTTAACATATCGACAAGCAACTTCAGCCATTTCCTTAGCACCTATTGCTTGCTTCTATGAAAGGGAAAGGAAGCTGGAGGGTCACATAATATGTCTGCTTTTCATAAGTGCTCTTGTGGGGGTTACCTTCACACAATACCTGTTTCTTATGGGACTGGAATATACATCTACAACTTTCTCATGTGCATTTCTAAATATGGTGCCTGTATTTACCTTTATTATGGCACTGCCACTCAGGATAGAGAAGTTAAACATGAGAAAAGTGAGTGCTAAGGCAAAGGTTTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGGTGTTGATCCTTTACAAAGGAATGCCCATAGTCAAGCAAGAACAAGAGCACATTGCAGACAAAGACACAACAACACCATCAGCTTCCAAGTTAAAGAAATGGATAATAGGTTCACTGCTTCTCACTGCAGGATGTGGCTTGTGGTCTTCATGGTTTCTCATACAAGCAAGGATTAGCAGAAAGTATCCATGTCAATACTCTAGCACAGCCCTTTTGTCCTTTTTTGCTGCCATTCAATCAGCAATTTTAACTTTGCTCATTGACAGAAGTAAGACCAAATGGATTCTCAGAGGAAAGTTAGAGATTCTCACTGTTGTATATTCTGGGCTGGTTGGATCAGGCTTGTGCTATGTGGCAATGTCGTGGTGTGTGAAACAAAGAGGTCCAGTTTTCACTTCAGCATTCACCCCTCTTCTGCAGATGTTTGTGGCAGTGCTTGATTTCTCTATATTACAAGAGGAAATTTATTTGGGAAGTGTTGCGGGATCAATGTTGGTTATTTCTGGCACTTATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAAAATGCCATGAGGGATACTCAAGAAGATGAAGAATGTATGAATAGTTTTGAGGCCAATCCAAATGTAGCCTCTAAGCTAATGCCTAGAGGGGAACAAGGATTATCTGAATTACAAGTGAAGCAGTTGGCCATTGCAGTAACTAGAAGTTGA 1119 0.4004 MWKPVLVMIIVNLALAFVNIFLKKVLNEGVDYFTILTYRQATSAISLAPIACFYERERKLEGHIICLLFISALVGVTFTQYLFLMGLEYTSTTFSCAFLNMVPVFTFIMALPLRIEKLNMRKVSAKAKVLGTFVCIGGALVLILYKGMPIVKQEQEHIADKDTTTPSASKLKKWIIGSLLLTAGCGLWSSWFLIQARISRKYPCQYSSTALLSFFAAIQSAILTLLIDRSKTKWILRGKLEILTVVYSGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILQEEIYLGSVAGSMLVISGTYILLWGKSKEEEQNAMRDTQEDEECMNSFEANPNVASKLMPRGEQGLSELQVKQLAIAVTRS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00135 372 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020
Viun2g00135 372 Pfam EamA-like transporter family 3 143 IPR000620 GO:0016020
Viun2g00135 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 319 - -
Viun2g00135 372 PANTHER WAT1-RELATED PROTEIN 4 326 IPR030184 GO:0016020|GO:0022857
Viun2g00135 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 39 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00135 Viun-Chr2 3002496 3006728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00135 1 248 Nodulin-like Gene Family AT3G30340 47.200 7.20e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00135 - - gmx:100794199 625.55