Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00125 ATGAAGCTTTCGTTTTCTGTCCCGTCATCGAAATCCCAATCAAAGCCCAAACCCGTCAATACCTTCGACGACACTTCCACCGCCCAAAACGACGCTGGCGGATCCAAACACCTCATCACCGAATTCGATCCTTCCAAACCCGCTCCCTCCCTCGCCCCCAAAACCCTAATTCCGCCAATCGAAAACCAATGGAAACCCTTTAAGAAGATGAAGAACCTCCACCTCCCCGCCGCCGACCCCGAATCCGAACCACTTACATTCGAAGTCCACGCCGCCGACGGCCAACCCGACTCCGACGTCACCTACGGCCTCAACCTCCGCACCGACAAAAAAAATGAGCAAAACAACGGCACAGCACTTCCGCCGCCGCCGCGCCGCGTTCCGGCGGAGAGCACGATGCTGCAGAAGCTGAAGGACGACATGGAGCGGCTACCGGAGGATCAGGGGTTTGACGAATTCAAGGATGTCCCAGTCGAGGGTTTTGGCGCGGCGCTGCTTGCCGGGTACGGGTGGAAGGAAGGGATGGGGATTGGGAAGAACGCGAAGGAGGACGTGAAGGTTAGGGAGATCAAGCGGAGAACTGCCAAGGAAGGATTGGGTTTTGTTGGTGATGCTCCTGCTGCGCTGGTTCGGAGTAGCAATGACAAGGACAATAAGGACAGGGAGAAGAATGAGAAGAATGAGAAGAATGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGCGGAAGGGTACTGTTGTGTCTTGTATAGGTGATGATTATCTTGTTTTGGAGCTATCCGGGAGTGAAGAGAAGGTGAAGGTGAAGGTGGGGGATGTTGCTGAATTGGGTTCTAAGGAGGAAGATAGGTGTTTGAGAAAATTGAAGGAGTCGAAGTCTCAGCGTGAGGATAGAGTGCCGAAGAAGAAGCACGACAGGGATGAGGTGGAGAATAGAGTGGATGTTAGTCGGAGAGAGGAGAGGAAAGGGGTGGATCGTAGGGATGTGGTTGAGGAGAAGAGAGTGGATGGTGGTAGGAGAGAGGAGAGAAAAGTGGTGGATCGGAGGAAGGTTTCTTGGCTTACTAGTCATATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGGCGGTTGTATTTGAAGAAGGGGGAGATTCTGGATGTTGTTGGACCTACCACTTGTGATGTATCTATGGATGAGAGCAGGGAGATTGTTCAAGGGGTATCCCAAGATTTTCTGGAGACGGCAATTCCGAAACGCGGGGGACCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGCATTTGGGAGTCTCGTGGAGAGGGATTTGGACCGGGAAATGGCCATTGTTAGGGATGCTGATACTCATGAGCTGCTAAATGTGAAGCTTGAACAAATTGCGGAGTATATAGGGGACCCAAGCTTGTTGGGACATTGA 1425 0.5221 MKLSFSVPSSKSQSKPKPVNTFDDTSTAQNDAGGSKHLITEFDPSKPAPSLAPKTLIPPIENQWKPFKKMKNLHLPAADPESEPLTFEVHAADGQPDSDVTYGLNLRTDKKNEQNNGTALPPPPRRVPAESTMLQKLKDDMERLPEDQGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVREIKRRTAKEGLGFVGDAPAALVRSSNDKDNKDREKNEKNEKNEKVVRIVGGRDAGRKGTVVSCIGDDYLVLELSGSEEKVKVKVGDVAELGSKEEDRCLRKLKESKSQREDRVPKKKHDRDEVENRVDVSRREERKGVDRRDVVEEKRVDGGRREERKVVDRRKVSWLTSHIRVRVISRDLKGGRLYLKKGEILDVVGPTTCDVSMDESREIVQGVSQDFLETAIPKRGGPVLVLAGKYKGAFGSLVERDLDREMAIVRDADTHELLNVKLEQIAEYIGDPSLLGH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00125 474 Gene3D - 359 413 - -
Viun2g00125 474 MobiDBLite consensus disorder prediction 213 237 - -
Viun2g00125 474 MobiDBLite consensus disorder prediction 202 237 - -
Viun2g00125 474 Pfam G-patch domain 145 201 IPR026822 -
Viun2g00125 474 SMART kow_9 413 440 IPR005824 -
Viun2g00125 474 SMART kow_9 227 254 IPR005824 -
Viun2g00125 474 MobiDBLite consensus disorder prediction 108 129 - -
Viun2g00125 474 MobiDBLite consensus disorder prediction 1 34 - -
Viun2g00125 474 ProSiteProfiles G-patch domain profile. 158 204 IPR000467 GO:0003676
Viun2g00125 474 PANTHER G PATCH AND KOW-CONTAINING 1 470 IPR045166 GO:0000398
Viun2g00125 474 SMART G-patch_5 156 202 IPR000467 GO:0003676
Viun2g00125 474 MobiDBLite consensus disorder prediction 1 57 - -
Viun2g00125 474 MobiDBLite consensus disorder prediction 289 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00125 Viun-Chr2 2811456 2815072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00125 351 447 C2H2 Transcription Factor Family AT1G55460 31.959 1.16e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00125 K13101 - gmx:100784983 652.514