Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00124 ATGGAATCGACTGGTTTGTGTAGTATTAGCGAAATTAATGTTCGTGATGCACCTCGTATTGCAACCAAAGTGTTGTGGACCTTCACCACAATTAACATACATGACCAGTTGTTTGTTTATGTGGATCGACGTTTTGCTGCGGCATTTGAAAATGAACTGACCCACCAATGGACTTTGTTTGATAGCTTCGAAAATCGATTTGTAGTTTCCTATAACATGGATAAAATGAATCCAAAATTAACGGATGAGTGGAAAGACCTGGAAAAGACATACAACACACAGATATGGGACTCATACGTCCAATTTCGTTATGTGGGCAACTCTACTTTCCAAATAACGGTTTTTATTGGCGAATTCACACCAAAGAATATGAAGGCATTCTTAGACACAGCATCGGTGGACCCTGGCACATCCCTTTTTGCGGTCACGTTGACTCAATGTCAAGCAAAAGCAAGTCACCTGGACTTGAATGTTGATTTTGCTGACGTCATCAAGAGCCTTGAGATGGAAGTGATATATCTAGTTGCACGTCTAAGTGGAGTTGAATGCAAACTGCTTGTGTCGCAAAAGAACAAATCAACAAAACTTGGACAAGGATGGAGGAAGTTTTGTGCTGAAAATAGGTTGAAGGAGGGAGACAGATTGGTGTTTGAGGTAGACCATGTTCAAAAACAACCTATAGTTGAGGTTTACATTAATGGGTGCTACTGTGATGTTGCAAAGTCCATAGATTTAGTATGA 741 0.4022 MESTGLCSISEINVRDAPRIATKVLWTFTTINIHDQLFVYVDRRFAAAFENELTHQWTLFDSFENRFVVSYNMDKMNPKLTDEWKDLEKTYNTQIWDSYVQFRYVGNSTFQITVFIGEFTPKNMKAFLDTASVDPGTSLFAVTLTQCQAKASHLDLNVDFADVIKSLEMEVIYLVARLSGVECKLLVSQKNKSTKLGQGWRKFCAENRLKEGDRLVFEVDHVQKQPIVEVYINGCYCDVAKSIDLV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00124 246 CDD B3_DNA 184 231 IPR003340 GO:0003677
Viun2g00124 246 Gene3D - 121 235 IPR015300 -
Viun2g00124 246 Pfam B3 DNA binding domain 156 230 IPR003340 GO:0003677
Viun2g00124 246 SUPERFAMILY DNA-binding pseudobarrel domain 135 233 IPR015300 -
Viun2g00124 246 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 44 230 IPR039218 -
Viun2g00124 246 Gene3D - 25 117 IPR015300 -
Viun2g00124 246 ProSiteProfiles B3 DNA-binding domain profile. 139 234 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00124 Viun-Chr2 2799429 2800356 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Viun2g00124 B3 1.1e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00124 - - vun:114168889 501.516