Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00112 ATGCCTCCAAACTCTCTCTCTTTCTCTTCCTTACTCTTTCTCTCCAAAATCACTTCCTCCACCATGCAACCTCTCACCAACTTTTTCCAAGATTACACCTTCCTCCTTTTCACCTCTTTCTTCTTCCTCCTCCTACCCTTCCTCCAATGGTGGCACCACCACAACCACAAAAAACTCCCCCCTGGCTCCATGGGTTGGCCCTACCTCGGAGAAACCCTCAAACTCTACACTCAAAACCCAAATTCCTTCTTCTCTAACCGCCAAAATAGGTATGGTGATATATTCAAGACAAACATATTGGGGTGTCCGTGTGTGATGATATCGAGCCCTGAGGCAGCTAGGACAGTGCTTGTGACGCAGGCACATCTGTTTAAGGCAACATACCCTCCCAGCAAAGAGAGGCTGATAGGACCAGAGGCTGTGTTCTTTCAGCAAGGTGCCTATCACTCCATGCTCAAGAGGCTGGTTCAGGCCTCCTTTTTGCCCTCCACAATCAAACACTCTGTCTCTCAGGTTGAGCAAATTGTTATCAAAATGGTGCCTTCTTGGACTAACAAAACCATCAACACCTTGCACGAGATGAAAAAGTATGCTTTTGAAGTAGCAGCAATCTCAGCCTTTGGTGAAATAAAGGAGTTGGAAATGGAAGAAATCAGAGAGTTATATCGTTGCTTGGAGAAAGGCTACAATTCTTATCCATTACATCTTCCTGGAACTTCCTATTGGAAAGCAATGAAGGCAAGGAAGCATTTGAATGAGAGCATAAGAAGGATAATAGAGAGAAGAAAAGTGGAGAGTTCAAAGTATGGAGGAGGACTATTGGGGGTTCTATTGCAAGCAAGATCATCACCATCAAGATCAAGATCAACATCTTCAAGATCTTCATCATGTGGTGAGGAGAAGAAGGTGTTCATGGAACTCACTGATTCTCAAGTAGCAGATAATCTGATCGGTGTGATATTTGCTGCACATGACACCACAGCAAGTGCCCTAACATGGGTCCTCAAGTACCTTCATGACAACTCCAATCTATTGGAAGCTGTGACGAGAGAACAAGAAGGAATAAGAAGCAAACTAGCTATGGAAAATCGTGGACTTTCGTGGGATGATACCAGGCAAATGCCATTCACAAATCGGGTTATTCAAGAAACATTGAGAAGTGCAAGCATTCTGTCATTCACATTCAGAGAAGCAGTGACAGATGTTGAGTTGGAAGGTTACACAATTCCAAAAGGTTGGAAGGTCCTTCCACTCTTCAGAAGCATTCATCATTCTGCTCACTTCTTCCCTCACCCAGAGAAGTTCGACCCTTCAAGATTCGAGGTGCCACCGAGACCAAACACATACATGCCTTTTGGAAATGGTGTCCACTCTTGTCCAGGCAGTGAGCTGGCCAAGCTCGAACTTCTTGTCCTTCTCCATCATCTCACACTTTCTTACAGGTGGGAAGTTGTGGGAAAAGAGGATGGAATACAATATGGTCCATTTCCTGTGCCAAAACATGGATTACCAGTGAAGATAACCCCAAGGAGAAAGATATTTACGTGA 1548 0.4451 MPPNSLSFSSLLFLSKITSSTMQPLTNFFQDYTFLLFTSFFFLLLPFLQWWHHHNHKKLPPGSMGWPYLGETLKLYTQNPNSFFSNRQNRYGDIFKTNILGCPCVMISSPEAARTVLVTQAHLFKATYPPSKERLIGPEAVFFQQGAYHSMLKRLVQASFLPSTIKHSVSQVEQIVIKMVPSWTNKTINTLHEMKKYAFEVAAISAFGEIKELEMEEIRELYRCLEKGYNSYPLHLPGTSYWKAMKARKHLNESIRRIIERRKVESSKYGGGLLGVLLQARSSPSRSRSTSSRSSSCGEEKKVFMELTDSQVADNLIGVIFAAHDTTASALTWVLKYLHDNSNLLEAVTREQEGIRSKLAMENRGLSWDDTRQMPFTNRVIQETLRSASILSFTFREAVTDVELEGYTIPKGWKVLPLFRSIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLELLVLLHHLTLSYRWEVVGKEDGIQYGPFPVPKHGLPVKITPRRKIFT 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00112 515 PANTHER CYTOCHROME P450 26 57 499 - -
Viun2g00112 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Viun2g00112 515 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 Gene3D Cytochrome P450 51 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 Pfam Cytochrome P450 60 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 FunFam Abscisic acid 8 49 509 - -
Viun2g00112 515 SUPERFAMILY Cytochrome P450 50 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00112 515 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00112 Viun-Chr2 2523593 2530572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00112 58 504 Cytochrome P450 AT3G19270 56.473 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00112 K09843 - gmx:100782541 825.854