Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00108 ATGGCTGATAAAGTCAATTTCGTAGTGGGATCCCATGTTTGGGTAGAGGACCCTGAGTTAGCTTGGATAAATGGAGAAATCCAGGAATCTAACAAAGACGAGGTCACGATCCTCTTTGAATCGGGCACGAGGGTTGTGAGAAAATCCGCTAACATGTATCCCAAAGATCCAGAATTCCCACCTGCTGGTGTGGAAGATATGACAAGACTGGCATATCTGCACGAACCAGGAGTTCTTCAGAATTTGCAAATTCGATATTCCATAAATGAGATTTATACATACACGGGAAGTATACTGATAGCTGTAAACCCTTTTCAAAAGTTACCTCATTTGACTGAAACTAGTACCATGGCAAAGTATAAAGGTGCGGCTTTTGGTGAGCAGAGCCCGCATCCTTTTGCAATTGCAAGTTCTGCATATAGCAAGATGATAAACGAAAAAAGAAGCCAATCTATTTTGGTTAGTGGAGAAAGTGGAGCTGGCAAGACAGAGAGTACAAAGATGCTTATGCATTATCTTGCTTTTTTGGGAGGGAGAGCAGCAACTGAAGGACGGTCGGTGGAGCAACAAGTTCTCGAGTCCAATCCAGTTTTAGAAGCATTTGGCAATGCAAAGACAGTTAGGAATAATAATTCTAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACATATTTGCTGGAACGATCCCGTGTTTGTCAAGTTTCTGATCCTGAGAGAAACTATCATTGCTTTTATATGTTGTGTGCTGCACCGAAAGAGGAATCTGGTAAGTACAAAGTGGGGGATCCAAGAAAATTCCATTACCTTAATCAATCAAATTGCATTGAGCTGGATGGGTTGGATGATTCTAAGGAGTACCTTGCAACTAAGAGAGCTATGGAGGTTGTTGGGATCAGCTCTGAGGAGCAGGATGCTATATTTCGAGTAGTAGCTGCAATACTTCATTTAGGAAACATTGATTTTGTTAAGGGAGCGGAAGAGGTGTTTGATTCCTGCCAGCCCAAGGATGAAAAATCCTATTTCCACCTAAAAACCGCAGCTGAGCTTTTGATGTGTGATGAGAAGTCCCTTGAAGAGTCTTTCTGCAAACGTATTATAGTGACTCATGGCGACACCATAACAAAATCACTTGATCCAAATTCTGCAGCTCTCAGAAGAGATTCATTGGCTAAAATAATTTATTCAAGGCTTTTTGACTGGATTATGTGTAAGATAAACAACACTATTGGGCAAGATCCAAAGTCAAATAGTTTGATTGGAGTTCTAGATATATATGGATTTGAGAGTTTCAAAACCAACAGCTTTGAGCAATTCTGTATCAATTTGGCAAATGAGAAATTACAGCAACATTTCAATCAGCATATCTTCAAAATGGAGCAAGAGGAATATAAAAGGGAAGAGATTGATTGGAGTTATATTGATTTCGTGGATAATCAAGATGTCATTGATCTCATAGAGAAGAAACCAGTTGGAATTATTGCTCTCCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCACGAAACATTTGCTGAAAAGCTGTACCAAACCTTCAAAGGCAACAAACGGTTCAACAAGCCAAAATTCTCTCGCACTGACTTCACCATTAAGCATTATGCTGGTGATGTCACTTATCAAACTGACCTTTTCCTGGATAAAAATAAAGACTACGCTATTCCAGAGCATGCTTCTATACTCAATGCCTCCAAGTGCTCCTTTGTTTCAGGGTTGTTCCCACCTTTACATGAGGATGCTACAAAATCGAAAAAGTTCTCTTCAGTTGCCACTCAGTTTAAGGCGTTTTGTTTTGCCAAGTATATAAATGCAAATTATCTCTGCCTTGTATTTATCTGCATTATGGTTAATGCACGTATTACAAAGCTGCAACTGCAATCTTTGCTTCAAACACTTAATGCTACCGAGCCACACTACATTCGTTGTGTAAAGCCAAATCATCTTCTGAAGCCAAGGATATTCGGGAACAAAATTGTGTTGCAGCAGCTTCGATGTGGAGGAGTAATGGAGGCAATTCGGATAAGTTGTGCTGGATATCCCACTAGAAAGAAATTTGATGAATTTGTTCAGAGGTTTAGCATCCTGGCACCTGAGGTTCTGAAAGAATGCCCTGATAAGAAGACTGCTTGCAAGAGGCTTCTAGATAGAGTGAATCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAAGTCAAATGGCAGAACTGGATGCATGTCGTGCAGAGGACCTGGGAAGATATGCAAGTGTCATTCAGAGCAAAGTCCGCACGTTTCTCTGTCAGAAACAGTTCATCTCATTGCTGTTGTCTGCCATAGGACTTCAAAGGGTTGCGAAAGGACAACTCGCACGACATCAGTATGAATGCATGAGGAGGGAAGCAGCTTCTTTGAAAATTCAGAAAGATTTTCTAATGCATATTTCCAGAAAAGCTTACAAAAATATTTATGACTCAGCTATTTATATTCAAATTGGTTTGAGGGGGATGGTTGCTAGAAATGACCTGAGATTCAGAAAACGATCACATGCTGCAGCTGTTATTCAGGGTCTATATAGAGGTTATACTGTTCGTACTTATTTCCGGAGGTTAAAGAAAGCAACAATTTTCGCAGTGTGTTCCTGGAAGAGAACAGTGGCTCGGAGAGAACTTCGAAAGCTTAAAATGGCTGCCAAAAACACAAAGGCACTTGAAGCTGCAAAAAATAATCTGGCAAAGCAAGTCAAAGATTTAATTTCGTCTCTAGAGGATGAGAAGAGAATGAGGCTACGACACAAGAAAATGAAAAACTACAACATGCTTTGCAAGAGAAAGAGGTTCAGTTGGAAGCCAAGACACAAGAAATTGAAAAACTAA 2916 0.4012 MADKVNFVVGSHVWVEDPELAWINGEIQESNKDEVTILFESGTRVVRKSANMYPKDPEFPPAGVEDMTRLAYLHEPGVLQNLQIRYSINEIYTYTGSILIAVNPFQKLPHLTETSTMAKYKGAAFGEQSPHPFAIASSAYSKMINEKRSQSILVSGESGAGKTESTKMLMHYLAFLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEESGKYKVGDPRKFHYLNQSNCIELDGLDDSKEYLATKRAMEVVGISSEEQDAIFRVVAAILHLGNIDFVKGAEEVFDSCQPKDEKSYFHLKTAAELLMCDEKSLEESFCKRIIVTHGDTITKSLDPNSAALRRDSLAKIIYSRLFDWIMCKINNTIGQDPKSNSLIGVLDIYGFESFKTNSFEQFCINLANEKLQQHFNQHIFKMEQEEYKREEIDWSYIDFVDNQDVIDLIEKKPVGIIALLDEACMFPRSTHETFAEKLYQTFKGNKRFNKPKFSRTDFTIKHYAGDVTYQTDLFLDKNKDYAIPEHASILNASKCSFVSGLFPPLHEDATKSKKFSSVATQFKVXFCFAKYINANYLCLVFICIMVNARITKLQLQSLLQTLNATEPHYIRCVKPNHLLKPRIFGNKIVLQQLRCGGVMEAIRISCAGYPTRKKFDEFVQRFSILAPEVLKECPDKKTACKRLLDRVNLKDYQIGKTKVFLRASQMAELDACRAEDLGRYASVIQSKVRTFLCQKQFISLLLSAIGLQRVAKGQLARHQYECMRREAASLKIQKDFLMHISRKAYKNIYDSAIYIQIGLRGMVARNDLRFRKRSHAAAVIQGLYRGYTVRTYFRRLKKATIFAVCSWKRTVARRELRKLKMAAKNTKALEAAKNNLAKQVKDLISSLEDEKRMRLRHKKMKNYNMLCKRKRFSWKPRHKKLKN 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00108 972 Gene3D - 698 761 - -
Viun2g00108 972 Gene3D - 441 654 - -
Viun2g00108 972 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 817 913 IPR027417 -
Viun2g00108 972 SMART iq_5 836 858 IPR000048 GO:0005515
Viun2g00108 972 SMART iq_5 884 906 IPR000048 GO:0005515
Viun2g00108 972 SMART iq_5 765 787 IPR000048 GO:0005515
Viun2g00108 972 SMART iq_5 788 810 IPR000048 GO:0005515
Viun2g00108 972 SMART iq_5 813 835 IPR000048 GO:0005515
Viun2g00108 972 SMART iq_5 861 883 IPR000048 GO:0005515
Viun2g00108 972 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 FunFam unconventional myosin-Va 816 864 - -
Viun2g00108 972 ProSiteProfiles Myosin motor domain profile. 62 763 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 ProSiteProfiles IQ motif profile. 792 818 IPR000048 GO:0005515
Viun2g00108 972 ProSiteProfiles IQ motif profile. 814 840 IPR000048 GO:0005515
Viun2g00108 972 Gene3D - 864 913 - -
Viun2g00108 972 Gene3D - 766 816 - -
Viun2g00108 972 Gene3D - 817 863 - -
Viun2g00108 972 Gene3D Kinesin motor domain 65 693 IPR036961 -
Viun2g00108 972 CDD MYSc_Myo11 76 751 IPR036018 -
Viun2g00108 972 SMART MYSc_2a 56 764 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 ProSiteProfiles IQ motif profile. 839 866 IPR000048 GO:0005515
Viun2g00108 972 Pfam Myosin N-terminal SH3-like domain 10 49 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 Coils Coil 908 942 - -
Viun2g00108 972 Pfam Myosin head (motor domain) 64 751 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun2g00108 972 Pfam IQ calmodulin-binding motif 864 883 IPR000048 GO:0005515
Viun2g00108 972 ProSiteProfiles IQ motif profile. 862 889 IPR000048 GO:0005515
Viun2g00108 972 FunFam Class V myosin 441 590 - -
Viun2g00108 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 817 IPR027417 -
Viun2g00108 972 PANTHER MYOSIN 54 950 - -
Viun2g00108 972 FunFam Myosin heavy chain 252 307 - -
Viun2g00108 972 Gene3D - 252 310 - -
Viun2g00108 972 Gene3D Myosin VI head, motor domain, U50 subdomain 312 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00108 Viun-Chr2 2422408 2432148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00108 1 943 Myosins gene family AT1G04160 68.114 0.0 1348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00108 K10357 - gmx:100788123 1453.73