Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00101 ATGGACACAAACTCAACATTGATCTTCACTTTCACACTCCTTCTCTTCGCCATCATCACCTTTCTCAAAGTCCTCACATCACTTCTCAGTCCGAACAAAACCAAACCAAACCTTCCACCAGGCCCTAAGGGTCTTCCTGTTGTGGGAAACCTCCTCCAACTGGGTGCCAAGCCCCACCAAACCCTGGCCACCCTGGCCAAGACTCATGGCTCAATAATGAGCCTCAAACTGGGCCAAGTAACCACCATCGTGATGTCCTCAGCAGAAGCAGCCAAAGGGGTGCTCCAAATCCATGATCACTTTCTCTCAAACAGGAAGATCCCTGATGCAATGAAAGGTGCCAACCATGACCACTTCAGCTTGCCCTTCATCCCAGTTTCACAACAGTGGAGAGAGCTGAGGAAGCTCTGCAATGGCCTCTTGTTCTCCAACAAGAACTTGGACGCCACTGTGGAGCTCAGAAGCAAGAAGGTTCGAGAGCTTTACAGTGACATTCACCACAGCAGCTTGAAGGGTGAACCTGTGAACATTGGAAGAATGGCTTTCAAGACGATAATAAATCAGCTGTCAAACACAATCTACTCAGAGGATTTGATTCAGTCTGCGGAAAAAGCTGGGGAGATGAAGGAGTTGGTGACCAACATCATGAAAGAGGTTGGAAGGCCAAATTTGGCTGATTGTTTCCCAGTGCTGAAGATGATTGACCCTCATGGAATCAGAAGACGCACAGGAAGCTACTTTGAGAAGCTTTTGAACATATTCAAGAGCTTGATTCACAAAAGGTTGGAACTGAGAAACGATGCTGCTGGTTACTGCACCAAAAGGGACATGTTGGATGCCATGCTCAACGATGCTGAGCATAAGATGGACATAGTTAAGATTCAACGATTGTCATTGGATTTGTTTGTGGCAGGAACTGATACAGTGACATCTACGGTAGAATGGGTAATGGCTGAGTTACTTCACAACCCACATGTTATGTCAAAGGCAAAAGAAGAGTTAGAGAGGGTTATAGGAAAGGGTAACCTTGTGGAAGAGTCAGACATAGCAAAACTCCCTTATTTGCGGGCTATAGTGAAAGAGACTTTCAGGCTGCACCCTGCAGTTCCACTTTTGCTACCCAGAAAAGCTGAAGTGGAATTTGAGATGCATGGACACACCATTCCAAAGGGTGCACAAGTGTTGGTTAATGTGTGGGCCATAGGGAGGGACCCTAATTTGTGGGACAAACCTAGTTTGTTTTGGCCTGAGAGGTTTTTGGAATCAGAAATTGACTTCAAAGGAAGGAGTTTTGAGCTAACCCCATTTGGTGGTGGGAGGAGAATATGCCCTGGTTTGCCATTGGCCATAAGGTTGGTGTTCTTGATGTTGGGATTGTTCATCAATTCCTTCGATTGGGAGCTTGAGGGTGGGATTAAAGCAGAGGATATGAACATGGATGAAAATTTTGGACTAACCTTGGAGAAGGCTCAACCTGTGTTAGCTGTTCCAATCATACCAAAACATTAG 1509 0.4592 MDTNSTLIFTFTLLLFAIITFLKVLTSLLSPNKTKPNLPPGPKGLPVVGNLLQLGAKPHQTLATLAKTHGSIMSLKLGQVTTIVMSSAEAAKGVLQIHDHFLSNRKIPDAMKGANHDHFSLPFIPVSQQWRELRKLCNGLLFSNKNLDATVELRSKKVRELYSDIHHSSLKGEPVNIGRMAFKTIINQLSNTIYSEDLIQSAEKAGEMKELVTNIMKEVGRPNLADCFPVLKMIDPHGIRRRTGSYFEKLLNIFKSLIHKRLELRNDAAGYCTKRDMLDAMLNDAEHKMDIVKIQRLSLDLFVAGTDTVTSTVEWVMAELLHNPHVMSKAKEELERVIGKGNLVEESDIAKLPYLRAIVKETFRLHPAVPLLLPRKAEVEFEMHGHTIPKGAQVLVNVWAIGRDPNLWDKPSLFWPERFLESEIDFKGRSFELTPFGGGRRICPGLPLAIRLVFLMLGLFINSFDWELEGGIKAEDMNMDENFGLTLEKAQPVLAVPIIPKH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00101 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Viun2g00101 502 CDD CYP76-like 66 497 - -
Viun2g00101 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 498 - -
Viun2g00101 502 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 FunFam Cytochrome P450 76C4 30 496 - -
Viun2g00101 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 SUPERFAMILY Cytochrome P450 39 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00101 502 Pfam Cytochrome P450 39 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00101 Viun-Chr2 2240286 2242871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00101 13 498 Cytochrome P450 AT2G45550 45.565 2.78e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00101 - - lja:Lj2g3v0039250.1 653.669