Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00094 ATGGGTTCTAACTCGAAAGAGAGTGAAATTCCTATGGAAGTAGAGAAGGTGGATGATGATGCATACCGTTCTGCTGTGTTGCTGTGTTTCAGCAGAGTCCTCCCTGCAATTCTAAACGCTGCTATAGACATGAATTTGTTTGATGTGATAGCAAAGGCAAAAAGTTGTTCTGATGACTCAAGTTTTTCTGCTTCTGAGATTGCTTCTTTGCTTCCAAATCAGCACCCACAATTGGCTAATAGGCTTGAAAGAATGTTGCCACTCTTGGTCAGTTACTCTCTTTTACGTTGCTCCATTCGCACCGATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCACACCAGTTGGACAATACTTTGCTTATGATGATCAAGGAATCTCTTTGGCTCCACTTTCAACCTTACTTCATCGTGGATTTCACGACCTTTGGAAGGATGCAAAAGGTGCATTTCTGGACCCTAATTGCAGTAACCATTTTGAAAGTGTGTTTGGAATGCTGTCATATCAATATATGGAGAAGGATGCAGAGTTGAATCAAATGTTTTACAAAGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAGAGTACTCAAAGTATATAAAGGATTTGAAGGGTTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGAGAGACCCTGAAACTCATTCTCTCTGCATACCCTTCGATTAAAGGGATTAACTTTGATTTGCCTCAGATGATTCAAGATGCACCTCCTCATCCAGGTGTGGAGCATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAATGGGGATGCCATTTTGGTAAAGTCTATATGTCACAACTGGGCAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCACCACATGGGAAAGTGATTGTTTTGGATTATATAATTCCAGAGGTTCCCAATTCAAGTGATGCATCTAAACATAGTACTATTGTGGACAATCACATGCTTTTAGCACATGGAGGGAGGGAAAGAACTGAGACTGAATTTGAGAGCTTGTGCAAGAGTTCTGGTTTTTCCAAGTTTCATGTTGCATGTAGTGACATATCAGCTACTGTGGGAGTGATGGAGTTCTATAAGTAG 1113 0.4061 MGSNSKESEIPMEVEKVDDDAYRSAVLLCFSRVLPAILNAAIDMNLFDVIAKAKSCSDDSSFSASEIASLLPNQHPQLANRLERMLPLLVSYSLLRCSIRTDEDGKRERVYALTPVGQYFAYDDQGISLAPLSTLLHRGFHDLWKDAKGAFLDPNCSNHFESVFGMLSYQYMEKDAELNQMFYKAMAHAGPIEVKRVLKVYKGFEGLSTLVDVGGGVGETLKLILSAYPSIKGINFDLPQMIQDAPPHPGVEHVGGDMFESVPNGDAILVKSICHNWADEDCIKFLRNCHKALPPHGKVIVLDYIIPEVPNSSDASKHSTIVDNHMLLAHGGRERTETEFESLCKSSGFSKFHVACSDISATVGVMEFYK 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00094 370 PANTHER O-METHYLTRANSFERASE 29 358 IPR016461 GO:0008168
Viun2g00094 370 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Viun2g00094 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 358 IPR029063 -
Viun2g00094 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 370 IPR016461 GO:0008168
Viun2g00094 370 FunFam Caffeic acid 3-O-methyltransferase 3 120 - -
Viun2g00094 370 PIRSF O-mtase 3 370 IPR016461 GO:0008168
Viun2g00094 370 Gene3D - 1 120 IPR036388 -
Viun2g00094 370 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Viun2g00094 370 SUPERFAMILY "Winged helix" DNA-binding domain 20 124 IPR036390 -
Viun2g00094 370 Gene3D Vaccinia Virus protein VP39 122 370 IPR029063 -
Viun2g00094 370 CDD AdoMet_MTases 209 306 - -
Viun2g00094 370 FunFam Uncharacterized protein 121 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00094 Viun-Chr2 2129720 2131300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00094 1 356 Monolignol Biosynthesis Gene Families AT5G54160 45.961 1.00e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00094 - - gmx:106794104 561.992