Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00076 ATGTTTTTGTATATTGTAGTGTCTGTATCAATTTTTCTCTCCTTGATGTTCTTCAACATAGGTTGGAGACATAATAGAGATGTACCCCTTACAAATTGGCCTATCATGGGTATGTTACTTGGTGTTCTACAAAATTTGTCCAACATTCACGATTATACAATCTTAGTTTTGAAACATCATGGAGGTACTCTGATGTTCGAAGGACCCTGGTTCACAAACATGAACTGCATTCTCACAGCAGATCCCATGAACGTGCACCACATCACAAGCAAGAACTTCAGCAACTATGGGAAGGGGTCCCATCTGCGTGAAATTTTTGATTATTTTGGAGAAGGGATCATTAACTCTGATAATCTCCATGCATGGAAACTAGAGAGGTCAATACTTCATTCAGTTCTTCAAAGGGAAACCTTTAACACTTTCCTTCGAAAAACCATTCTGAAGAAGCTAGAGAATGACCTAATTCCATTTCTTGATCATACATCCGAGATTGGAACTGAGGTAGACCTACAATTTGACCTTCGGAGGTTCACATTTGACATTGTCTGCTCTTGTTTTCTTGGTTGTGATCCTCAGTCCCTTCCGAACAAGATTACTCAGCTTTCACACCCTGCTTATGAGAGAGCCACGGTTGTGATGGAGGAGGTATTGTTTCACAGGCACATCACACCAAGGTGGTTGTGGAAGTTGCAGGAGTGGCTCCAGATTGGCCAAGAGAAGAAGTTCAAGGAAGCTAGAGAAATTTTTGATAAATTCTTGTATGAATGCATTGCATCCAAGCGTGAAGAGAAAAATAGATGCAAAAGCACCAAAGAAGTGGAAGATACTCATCATGACTTGCTGGGAGTGCTAATGGAGGAAGGAGCTCAAAAGGGGAGAGTAATTGATGACAAGTATCTGAGAGACACTGCAGTTACCTTTTTTGCTGCTGGAAGTGGCACAATCAGTGCAAGTCTCAGTTGGTTCTTTTGGCTGGTTTCAACTCATCCATATGTGGAAACTAAAATTCTTGAAGAGATCAAAGATAATTGCATAGACCAAGATGGATCTTGGATTGCTTCTGGTGTGGAAGAGTTTGGAAAGTTAGTTTATCTCCATGGAGCTATATGTGAAGCACTGAGGCTTTTTCCTACTGTGCCCTATGATCATAAGTGTGCAATCAAATCTGATACACTTCCTAGTGGACACCATGTTAGTCCAAATACCATGATATTGTACTCTTTGTATGCAATGGGAAGAATGGAGCAAATATGGGGACATGACTGCATGGAGTTTAAGCCTGAGAGATGGATTTCAGAGAGTGGAGACATTGTACAAATTCCATCTCACAAGTTCATAGCGTTCAATGCAGGCCCTAGAAGTTGTTTGGGTAAGGACATTGCTTTTATTGAAATGAAGATGGTTGCAGTTGCTGTACTTTGGAGGTTTCAGATGCAGGTGGTGGATTGTCATCCTATAACACCAAGAGTCTTTGTGTTGCTTACCATTGAACAAGGCTTGAAGGTTAAAGTTACCAAAAGATGCACCTGA 1530 0.4092 MFLYIVVSVSIFLSLMFFNIGWRHNRDVPLTNWPIMGMLLGVLQNLSNIHDYTILVLKHHGGTLMFEGPWFTNMNCILTADPMNVHHITSKNFSNYGKGSHLREIFDYFGEGIINSDNLHAWKLERSILHSVLQRETFNTFLRKTILKKLENDLIPFLDHTSEIGTEVDLQFDLRRFTFDIVCSCFLGCDPQSLPNKITQLSHPAYERATVVMEEVLFHRHITPRWLWKLQEWLQIGQEKKFKEAREIFDKFLYECIASKREEKNRCKSTKEVEDTHHDLLGVLMEEGAQKGRVIDDKYLRDTAVTFFAAGSGTISASLSWFFWLVSTHPYVETKILEEIKDNCIDQDGSWIASGVEEFGKLVYLHGAICEALRLFPTVPYDHKCAIKSDTLPSGHHVSPNTMILYSLYAMGRMEQIWGHDCMEFKPERWISESGDIVQIPSHKFIAFNAGPRSCLGKDIAFIEMKMVAVAVLWRFQMQVVDCHPITPRVFVLLTIEQGLKVKVTKRCT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00076 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Viun2g00076 509 PANTHER CYTOCHROME P450 17 500 - -
Viun2g00076 509 Pfam Cytochrome P450 30 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 CDD CYP86A 65 500 - -
Viun2g00076 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 Gene3D Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00076 509 SUPERFAMILY Cytochrome P450 31 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00076 Viun-Chr2 1690292 1692144 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00076 1 507 Cytochrome P450 AT2G23180 41.651 2.41e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00076 - - gmx:100791312 768.459