Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00028 ATGGATCTTCAGATCTTTGATATGTTAGCTCCTATCTCCCTTTTCCTGCTCATGATAGTGGCACTGAAATTGGGGAGGAATCTCACCAAAACCAAGGCAAATCCAAACCCACCTCCAGGACCATGGAAGCTACCTATCATAGGAAACATACCCCATCTTGTTACTCCAACACCACACAGAAAACTAAGAGACTTGGCCAAAAAATATGGACCCTTGATGCATCTCCAACTTGGAGAGGTCTTCACTGTGGTTGTTTCCTCAGCAGAATGTGCCAAAGAGGTAATGAAAACTCATGATCTTGTCTTTGCATCAAGGCCTCTGATTCTAGCCTCAAAGATAATCGGTTATGATGCCACAAACATATCTTTTTCCCCTTACGGAAATTATTGGAGACAGCTGAGGAAAATTTGCACAGCTGAGCTTTTCACTCCAAAACGTCTCAGTTCATTTAAGCCTATAAGAGAAGAAGAGCTCTCAAGTCTCATCAACATGATTGCTTCAGAAGATGGATCACCATTCAATCTCTCTGAGGCACTGCTCACATCCAACTATGCAATAATTTCAAGAGCAGCTTTTGGCAAGACGTGCAGAGAGCAAGAAGAATACATATCAGTGCAAAAAGAAGTGCTTAAGGCTGCAGGAGGATTTGACATTGGAGATTTTTTTCCTTCTGCCACATGGCTTCAGAATTTTACTGGTTTGAGGCCTACCCTTGAGAGATTGCACAGAAAAAGTGATCAAATACTTGAAAACATCATGAGGGAGCACAAAGATAAAAAGTCAAAAGCCAAAGAAGGTCTGGTTGAAGCAGAAGAGGACCTTGTAGATGTCCTTCTAAAGTTTCAGGATGATAGTGGTGAAGATCAGGATATTTGCTTGACTGATGACAACATCAAGGCCATAATTGATAATATCTTTGCTGCTGGAGGTGAGACATCAGCAACTACCATAGATTGGACAATGGCAGAGATGATAAGGAATCCAAGGGTGATGAAGAGAGCACAAGCTGAAGTGAGAGAGGTGTTCAAGATGAATGGAAGGGTTGATGAAACTTGCATCAATGAAATGAAATATTTGAAGTTGGTTATCAAAGAGACCCTGAGGTTACACCCACCAGCACCTCTTTTACTTCCAAGAGAATGTGGAGAAGCATGTGAGATTGATGGGTATCATATACCAGTGAAAAGCAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATCCAAACAGTTGGAGTGACCCAGAGAGGTTTTATCCTGAGAGATTTAGTAATAGCTCTCTTGACTACAAAGGGAATAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGTATCACATTTGGTTTGATGAATGTTGAGCTCACGCTTGCACTTTTGTTGCATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGCTGAGGAATTGGACATGACTGAGCAATTTGCCCTAACAGTTAGAAGAAAAGATGGTCTGTTTTTGATTCCCTCCACTGCAACACAATGCTCATAA 1527 0.4132 MDLQIFDMLAPISLFLLMIVALKLGRNLTKTKANPNPPPGPWKLPIIGNIPHLVTPTPHRKLRDLAKKYGPLMHLQLGEVFTVVVSSAECAKEVMKTHDLVFASRPLILASKIIGYDATNISFSPYGNYWRQLRKICTAELFTPKRLSSFKPIREEELSSLINMIASEDGSPFNLSEALLTSNYAIISRAAFGKTCREQEEYISVQKEVLKAAGGFDIGDFFPSATWLQNFTGLRPTLERLHRKSDQILENIMREHKDKKSKAKEGLVEAEEDLVDVLLKFQDDSGEDQDICLTDDNIKAIIDNIFAAGGETSATTIDWTMAEMIRNPRVMKRAQAEVREVFKMNGRVDETCINEMKYLKLVIKETLRLHPPAPLLLPRECGEACEIDGYHIPVKSKVIVNAWAIGRDPNSWSDPERFYPERFSNSSLDYKGNNFEFIPFGAGRRICPGITFGLMNVELTLALLLHHFDWKLPNGMKAEELDMTEQFALTVRRKDGLFLIPSTATQCS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00028 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Viun2g00028 508 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 Coils Coil 253 273 - -
Viun2g00028 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 FunFam Cytochrome P450 71D8 30 501 - -
Viun2g00028 508 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 Gene3D Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00028 508 PANTHER OS08G0105600 PROTEIN 61 503 - -
Viun2g00028 508 CDD CYP71-like 68 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00028 Viun-Chr2 795455 797390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00028 9 502 Cytochrome P450 AT3G26300 42.315 1.95e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00028 - - gmx:100801936 726.472