Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00026 ATGCCTGTTTTTGGCTATTTCATCATGACATTTCAAGTGCCTGATATATTAACCCTTTTCGCTTTTTCTGTTCTCATGATTGTGTTGCTAAAAATAGTGTTGAATCATGAGAAAGCAAGCTCAATTCCAAACATGCCTCCAGGGCCATGGAAGCTACCAATCATAGGAAACATACATCAGCTTCTTACTTCTGCACCACATCAAAAGTTGAGAGACCTGGCAAAAATTCACGGACCCTTGACGCGTCTGCAACTTGGAGAGGTGACAGTCATCATTGTTTCCTCACCCAAGTACGCTAAAGAGATAATGAAAACTCATGATGCTATCTTTGCTTCAAGGCCCCACAGTGTAACTTCAGATATACTTTCCTATCAATCCACAGGTATTGCTTCTGCACCTTATGGAAATTACTGGAATGTTGTACGAAAGATGTGCACAGTGGAGCTTTTGGGCAAGAACCGAGTCACTTCATTTCAATCATTAAGAAAAGAAGAACTCACTAATCTCATCAAAATGATTGATTCCAAGAAAGAATCACCCGTCAACCTCACCGAAACAGTGCTCTCATCGATATATTCTATCGTTTCAAGAGCTGCATTTGGCAATAAATGCAAAGACCAACAAGAATTCATCTCACTGGTGAAAGAAGGACTTGCAGTGCTGGGTGATTTATTTCCTTCTGGTCGATGGCTTCAACTTGTCACTGGTTTTAGGCCTAAGCTTGAGAGGTTACATGAAAAAATTGATCGGATTCTAGAAAACATCATCGTTGAACATAAAGAGACAAAGTCAGATGGGAAAGAAGGCGAAAGTGCAGAAAGTGAAGATTTGGTAGATATTCTGTTAAAACTTCAGGATGGTAATGACAGAAACCAGAATATCTGTTTAACTGATAACAATATCAAGGCTACAATCCAGGAAATATTTAGTGCAGGAGGTGAACCATCAGCCATTACTATAGATTGGGCAATGGCTGCGATGGTAAAGGATCCAAGAGTGATGAAGAAGGCACAAGCTGAAGTGAGAAAGGTAATGAAGATGAAAGGAAGGGTTGATGAGAGTTGCATGAATGAACTCAAATATTTGAAAGTGGTAGTGAAGGAGACCCTAAGATTGCACCCTCCAGGTCCTCTTTTACTTCCAAGGGAATGCGGAGAGACATGTGAGATTGATGGGTATCATATTCCAGCCAAAAGTATGGTGATTGTGAATGCCTGGGCCATTGGAAGAGATCCAAACTATTGGAGTGACCCAGAGAGGTTTTATCCTGAGAGATTCATTGATAGCTCAATTGACTACAAAGGATGTAATTTTGAGTACATTCCATTTGGAGGTGGAAGAAGAATATGCCCAGGTATCACATTTGGTTTGGCAAATGTTGAGATGGCACTTGCGTTGTTGTTGTACCATTTTGATTGGAAGCTTCCCAATGGAATGAGATGTGAGGAATTGGATAACACTGAGGAATTTAGAGTGACTATCAGAAGAAAAGATGACTTGTTCTTGATTCCTCTATCTCCTCCTACTCTGGTTTCACAAATTTGA 1545 0.4032 MPVFGYFIMTFQVPDILTLFAFSVLMIVLLKIVLNHEKASSIPNMPPGPWKLPIIGNIHQLLTSAPHQKLRDLAKIHGPLTRLQLGEVTVIIVSSPKYAKEIMKTHDAIFASRPHSVTSDILSYQSTGIASAPYGNYWNVVRKMCTVELLGKNRVTSFQSLRKEELTNLIKMIDSKKESPVNLTETVLSSIYSIVSRAAFGNKCKDQQEFISLVKEGLAVLGDLFPSGRWLQLVTGFRPKLERLHEKIDRILENIIVEHKETKSDGKEGESAESEDLVDILLKLQDGNDRNQNICLTDNNIKATIQEIFSAGGEPSAITIDWAMAAMVKDPRVMKKAQAEVRKVMKMKGRVDESCMNELKYLKVVVKETLRLHPPGPLLLPRECGETCEIDGYHIPAKSMVIVNAWAIGRDPNYWSDPERFYPERFIDSSIDYKGCNFEYIPFGGGRRICPGITFGLANVEMALALLLYHFDWKLPNGMRCEELDNTEEFRVTIRRKDDLFLIPLSPPTLVSQI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00026 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 CDD CYP71-like 77 500 - -
Viun2g00026 514 PANTHER CYTOCHROME P450 71B11-RELATED 28 505 - -
Viun2g00026 514 Pfam Cytochrome P450 46 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 SUPERFAMILY Cytochrome P450 46 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun2g00026 514 FunFam Cytochrome P450 71D8 38 504 - -
Viun2g00026 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Viun2g00026 514 Gene3D Cytochrome P450 40 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00026 Viun-Chr2 715975 717817 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00026 24 504 Cytochrome P450 AT3G26300 43.373 1.62e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00026 - - pvu:PHAVU_003G009300g 798.89